Pseudoliparis swirei (Mariana hadal snailfish): 130212561
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Entry
130212561 CDS
T09868
Symbol
rhbdl2
Name
(RefSeq) rhomboid-related protein 2
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130212561 (rhbdl2)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
130212561 (rhbdl2)
Peptidases and inhibitors [BR:
pswi01002
]
Serine peptidases
Family S54: Rhomboid family
130212561 (rhbdl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Motif
Other DBs
NCBI-GeneID:
130212561
NCBI-ProteinID:
XP_056299544
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All DBs
Position
22:7043142..7051452
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AA seq
298 aa
AA seq
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MEAIDLEQQEPLPVDRDGRRLGSEADQPDGVRKMGCCEKFQRSVSKWMLPKDSRSKYLER
ANCCPPPIFIILISIAELAVFVYYAVWKPQKQWVTLDESIWRSPLTYKPDDRQEAWRFIS
YMFVHAGVQHIVGNLLMQLLLGIPLELVHKGFEVGMVYMAGVLAGSLASSIFDPLSALVG
ASGGVYALIGGFFMNAVVNFREMIPLLGVFRILAIVIFVGTDFGFAFYRRFLSDEAGLKV
SFVAHFGGIAAGMTIGYVFFSAYNKKLMKDPRFWLCIGGYMLFVVFAVVFNIFLSPAS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcgacctcgagcagcaggagccgctcccggtggaccgagacgggcggcgg
ctcggcagtgaagccgaccagcccgatggtgttagaaagatgggatgttgcgagaagttc
cagcggtccgtctccaaatggatgcttccaaaagactcccgcagcaagtacctggaacgg
gccaactgctgcccgccccccatcttcatcatcctcatcagtattgcagagctggccgtg
tttgtctactacgccgtgtggaagcctcagaagcagtgggtgaccctggacgagagcatc
tggaggagccccctcacgtacaagcctgacgaccggcaggaagcatggcgcttcatctcc
tacatgtttgtccacgccggcgttcagcacatcgtgggaaacctgttgatgcagctgctg
ctgggcatcccgctggaactggtccacaagggatttgaagtggggatggtttatatggcg
ggcgtcctggcaggctcgttggccagctccatctttgatcccctcagtgctttggtggga
gcgtctggaggcgtctacgccctcatagggggctttttcatgaacgcagtggtgaatttc
cgagagatgattcctctcctcggagtatttcggatcctcgcgatagtgatatttgttggg
accgattttggatttgccttctacagacggttcctctcggacgaggctggattgaaggtg
tcttttgtggctcattttggagggatcgcggccgggatgaccatcggctacgtcttcttc
agcgcctacaataagaagctcatgaaagacccacgcttctggctctgcataggcggatac
atgctgttcgtggtctttgctgtggtcttcaacatcttcctgagcccggcttcatag
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integrated database retrieval system
