Pseudoliparis swirei (Mariana hadal snailfish): 130212585
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Entry
130212585 CDS
T09868
Name
(RefSeq) CUGBP Elav-like family member 3 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130212585
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130212585
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
130212585
NCBI-ProteinID:
XP_056299586
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Position
22:13600407..13626872
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AA seq
460 aa
AA seq
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MKEADAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES
ALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGS
IDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERG
LRRMQQVASQLGIFSPMTLNFPAYNAYTQAVNAQLVQQQALVAQSAYLSPVATVAAVQMQ
QMAALTANGIIATPITPITTSSGTNTPPTMAATPVPALPPPLGLNGYGSLSGPTNGHQAT
EALYTNGIHPFQAHSPASLDPLQQAYAGMQHYTGWSAYPAAYGLVGQPFPQQPTLVAQQH
QQPQQQQQREGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGF
VSFDNPACAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggccgacgccatcaagctgtttgtggggcagattccccggaatctggaagag
aaggacctcaagcctatctttgagcaatttggcaagatctatgagctaactgtgattaag
gacaaatacacaggcatgcacaaaggatgtgcgtttctgacgtactgtgcaagagagtcg
gcactgaaagcccagagcgctctacacgagcagaaaacactaccagggatgaatcggcca
atccaggtgaaaccagctgacagcgagggcagaggagaggaccggaagttgtttgtgggc
atgctgggaaagcaacagagcgatgaggatgtcagaagactgtttgagccctttggcagc
atagacgagtgtactgtgttgagaggacctgacggcaccagcaaaggatgcgcttttgta
aaattccaaggacacgccgaagcccaggctgccatcaacagcttgcacggaagccgcaca
atgcctggggcgtcgtccagtctggtggtgaagtttgccgacacagagaaggagcggggg
ctgaggaggatgcagcaggtggcctcccagctcggcatcttcagccccatgaccctcaac
ttccccgcctacaatgcctacacgcaggcggtcaacgcacagcttgtccaacagcaggcc
ctggttgcccagtcagcatacttgtctcctgtggcaacagttgccgccgtacagatgcag
cagatggcggcgctcactgccaacggaatcattgccacacccattacacccatcacaacg
tcctcgggtacaaatactcctcccactatggcagcaacacctgtgccagctctccctccg
ccattgggattgaatggttacggcagtctgtcaggccccaccaatggacaccaagcaact
gaagcactatacaccaatggcattcacccatttcaagctcatagtccagcctccctggac
cctctacagcaggcgtatgcaggcatgcaacactacacaggttggtcggcgtatcctgct
gcctacggattggtcggccagccgttcccccagcagccaacactggttgcccagcaacac
cagcagccccagcaacagcagcagagagaaggtccagagggctgtaacatctttatttac
cacctgcctcaggagttcagtgactctgagatgctgcagatgttcctgccctttggcaat
gtcatctcggcgaaggtgtttgttgaccgcgccaccaatcagagcaaatgcttcggattt
gtgagttttgacaatccagcctgtgctcaggccgccattcaggccatgaatggcttccag
attggcatgaaaagactgaaagtgcagctgaaaaggcccaaagatgccaaccgcccatac
tga
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