Pseudoliparis swirei (Mariana hadal snailfish): 130212592
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Entry
130212592 CDS
T09868
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
130212592
NCBI-ProteinID:
XP_056299607
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Position
22:3426909..3537296
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AA seq
1103 aa
AA seq
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MRPMPGSPPPVLPAVLALTLAAVWPRLSSGAAPFPQDLEPISIVGRESSYLYPSFQGLLS
DNDTVRLGLDFQRMLRINRMLYIAARDHVFAINLATSAEQIIPQQKLTWKTKDVEKCTLR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVGRVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINRRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFAGKFKEQRNS
ETAWTPVPEDQVPKPRPGCCAGEGSAAAYKSSTTFPDDTLTFIKSYPLMDESVPSVDDRP
YFTRTTSRFKLTQIAVDTSAGPHKNYTVVFLGSDNGRVLKILASTEGANASFSTQLLEDV
DVYNPDRCNVRGEDRRVLGLELDRDHHALFVAFSGCVIRVPLSRCSDYDTCKKSCLSSRD
PYCIWLKSGSCATVSPGFKGDFEQDVENGYHQHAETCHDVLATTRKQNTALDLAYGKTTP
TSASTTYHGAAASPKEAGDPERGAGPDGPPPVGEQGSPDSEPISVEMEGVRRPPELEKTN
HSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHGGHKTKKLSKDPEAPIPHALSLRSLAK
LNGLLDSQSRDDKLEVSSPKIYNSFFANSKEHHPPRRNGHNAMTMGDLVQPHHHLHHSSE
LSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNTGSRPSSALLHQQVFPYSH
GLSNGQPLVGGHLHPEERKIHNVERVLSQQPYPGYSQKVMEVTSLDELLKHIHEASSSKT
IQLMSPSGLMACGGDGGSGGGGGGGGGGGHLAFANRIQPQIPETESAPYYSSSTLPRDSL
TRRMDVPPDIPQHHQSTLERRHSSQRHSLIAAATKMPNGGGGGGGGGGMIPRQHSFSQRN
GGPHQPPPLLARMNSTGSSCEVHYPLIPNGYMAHQHSYSEEQHEVQQRGAVVRRASSLKP
DVPPKPLFIPATSPVNQQGKFNY
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatgcccggctcgcccccacccgtcctgccggccgtcctggcgctcaccttg
gccgccgtctggcctcggctgtcctcgggagcggcgccgttcccccaggacctggagccc
atcagcatcgtgggccgagagtcctcctacctctaccccagcttccagggcctcctgtcg
gacaacgacaccgtgcgcctgggcctggacttccagcggatgctgaggatcaaccgcatg
ctctacatcgctgcccgggaccatgtgtttgccatcaatctcgccacttcggccgagcag
ataatcccgcagcagaagctgacttggaagacgaaggatgtggagaagtgcaccttgaga
gggaagaacagcgacgaatgttacaactacatcaaagtgctggtgccgcgcaacgacgag
acgctcttcgcctgtggcaccaacgccttcaaccccacctgccgcaactacaagatgtcc
acgctggagcaggaaggggaggaggtggtgggacaggcccgctgccccttcgagtcccgc
cagtccaacgtgggcctgttcgcaggtggcgatttctactcggccaccatgacggacttc
ttggcgagcgacgcggtgatttacagaagtctgggagagagcagccccgtgctgcgcacc
gtgaagtacgactccaagtggctgcgagagccccatttcctccacgccattgagtacggg
aactacgtgtacttcttcttcagcgagatcgcggtggagtacaccaccctcggcaaggtg
gttttctccagagtggggcgcgtctgcaagaacgacaacggcggctcgccgagggtgctg
gagcgctactggacgtcgttcctcaaagcccggctcaactgctcggtgccgggcgactcc
ttcttctacttcgacgtcctgcagtcgctgaccaacgtgctgcagatcaaccgccggccg
gccgtgctcggcgtcttcaccacgcaggccaacagcatcacgggctcggccgtctgcgcc
ttctacatggacgacatcgagaaggctttcgccggcaaattcaaagagcagaggaacagc
gagacggcgtggacgccggttccggaggaccaggtcccgaaaccgcggccgggatgctgc
gccggagagggctcggcggccgcctacaagtcgtccaccaccttccccgacgacaccctg
accttcatcaagtcctacccgctcatggacgagtctgtcccctccgtggacgacaggccc
tacttcacccggaccaccagcagattcaagttgacccagatagcggtggacacgtcggcc
gggccgcacaagaactacaccgtggtgttcctgggctcggacaacgggcgcgtgctgaag
atcctggccagcaccgagggcgccaacgcctccttcagcacccaactgctggaggacgtg
gacgtctacaaccccgacaggtgtaacgtgcggggggaggaccggagggtgctgggtctg
gagttggaccgggaccaccacgccttgttcgtggcgttctccggctgcgtgatccgcgtg
ccgctgagccgatgctccgactacgacacctgcaagaaaagctgtctgtcttcgcgggac
ccttactgcatctggctgaagtcgggcagctgtgcaacggtctcacccggcttcaaaggc
gactttgaacaggatgtggagaacgggtaccatcaacacgctgaaacctgccacgatgtc
ctggccacgacccgcaagcaaaacacggcgctggatttggcgtacgggaagaccacaccc
acaagcgccagcacaacctatcacggggcggcggcgtccccaaaggaggcaggtgaccct
gaaagaggtgcaggtcccgatggccctccccccgtcggggagcaagggtcacctgactcg
gagccaatcagtgtggagatggagggtgtgaggcggccgccagagctggagaagaccaat
cacagtgtccactacaccctcctgatcgcttgtgttctggtggccttcgtcctcggcgcc
ttcctctccggcttcctggtctcctgctactgtaaccacgggggccacaagaccaagaag
ctgtcgaaggatcccgaggcgccgatcccgcacgccttgtccctccgcagcctggccaag
ctcaacggcctcctggacagccagagcagggacgacaagctggaggtgtcctctccgaag
atctacaactccttcttcgccaacagtaaggagcatcacccgccgaggagaaacggccat
aacgccatgacaatgggagacctggtccagccgcaccaccacctccaccattcctcggag
ctgtccggtctgccgacaccagattcgactccagaactgcccataaagagcatgaaagcc
ttcaagaaccagtgggagaagaaccagaactgcaacaatgccaaagagccaaagtcccac
aacactggctccaggcccagctccgccctgcttcaccagcaggtcttcccgtactcccac
ggcctgtccaatgggcagccattagtcggaggtcacctccacccagaggaacgcaaaatc
cataatgttgaacgtgtgctgtctcagcaaccttacccgggttactctcagaaggtgatg
gaggtaacctcactggatgagctcctgaagcacatccacgaggcgagcagcagcaagacc
atccagttgatgagcccgtcgggcctgatggcctgcggcggagacggaggcagcggaggc
ggaggcggcggaggcggaggcggtggtcatcttgcgttcgccaaccgcatccaaccccag
attcccgagacggaatcggccccctactatagctcatccactttacctcgagacagcctc
acccgacggatggacgtccctccggacattccccaacaccaccagtccaccctggagagg
aggcactcctcccagaggcactcgctaatcgctgcagccaccaagatgcccaacggcgga
ggaggcggcggcggcggaggcgggatgatacctcggcagcacagcttcagccaacggaac
ggcgggccccaccagccgcctccgctcctggcccggatgaactcgacgggcagctcctgc
gaggtgcactaccccctcattcccaacgggtacatggcgcaccagcacagctacagcgaa
gagcagcacgaggtccagcagaggggcgccgtcgttcgccgggcctcctccctcaaaccc
gacgtccctccgaagcccctgttcatacccgccacgtcccccgtcaaccagcaggggaag
ttcaactactga
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