Pseudoliparis swirei (Mariana hadal snailfish): 130212597
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Entry
130212597 CDS
T09868
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130212597
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130212597
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130212597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
Ank_2
Ank_5
Ank
IBR_2
Ank_4
Ank_3
UBA_ARI1
Nha1_C
Motif
Other DBs
NCBI-GeneID:
130212597
NCBI-ProteinID:
XP_056299614
LinkDB
All DBs
Position
22:23248772..23284736
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AA seq
1088 aa
AA seq
DB search
MGNAATKFRKAVLSGDEALAVHLYESNPQFKEALDPNASYGESYQHNTPLHYAARHAMSR
LLRSFLLSKDGNPNKRNVHNETALHLLCMGPQILTSEGAPHPRLSRPYEDERRRAESLQI
LLAWTGAKLDRGEYERADVNATDSRKSSCLHYAAAAGMKACVELLVQRGADLFAENEDRE
TPCDRAEQRRHEELALSLESQMVFSLAPEAEEAEYAALDRRELYEGLRPQDLRRLKDMLI
VETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNSGECCQRSGVQMPNPPPSGYNAWDT
LPSPRTPRATRCSATTSPQQVSLLPAGEEASLVRGAAASLSPKSCYTVVIRLAVDVLPAP
PSLRFLNLKIQEGDAHNISCPAVGCYQLVPVDVIESVVSREMDRRYLQFDIKAFVENNPA
IRWCPEAGCERAVRLSGRGTADPLGFPRLRAPAVDCGKGHLFCWECQGEAHEPCDCLTWR
SWQQKVSEMRPDELAGVSDAYEDAANSLWLLSNSKSCANCKSPIQKNEGCNHMQCAKCKY
DFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEITEEAEQKHKSFQELDRFMHYF
TRFKNHEHSCQLEQRLLKTATEKMEQLSRALRGREGGPPDTTFIEDAVLELLKTRRILKC
SYPYGFFLEPKSTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQKRQ
EFLASVARGVAPNDSPEAPRRSFAGGTWDWEYLGFASAEEYAEFQYRRRHRQRRRGDMSS
LRSNTPDPDDSSDSILDAQEEAAGRRRHLMALGSLDDDDPNILLAIQLSLQDSAMAEIWS
DRAVPANAASPGAVGASPPSRLEQSAPGAELLSRAARSGSERLDLGDNLARLGNIDIDID
IVTAQHRNGRRRAHGASAPIPVAPGGSDSSTGLFSSSSDTLDCTTGAGHDPSTSSAAVAD
ARLLGNIVAWFHDMNPRGVALVPPTSSDTDADLQEGGGGKPQEVAAEVGFVSRRPRGMRM
EEEEEQCAVAQRPTQLDLEPLPLTALDHAEQGGSKVRRVDTPQCDSGSDTLLSTSSSEWE
DQDQVHLV
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcggccaccaagttccgcaaggctgtgctcagcggggacgaggcgctggcc
gtccacctgtacgagagcaacccgcagttcaaggaggcgctggaccccaacgcctcctac
ggagagtcctaccagcacaacaccccgctgcactacgctgcccggcacgccatgagccgc
ctcctcaggtctttcctcctcagtaaagatgggaaccctaacaagcgtaacgtgcacaat
gagacggccctgcacctgctctgcatggggccccagatcctgacctcggagggggccccg
cacccccggctctcccggccgtatgaagacgagcggcggcgggccgagtccctccagatc
ctgctggcgtggaccggagccaagctggaccgcggggagtacgagcgcgccgacgtcaac
gccaccgacagcaggaagagctcctgcctgcactacgcggcggccgccggcatgaaggcg
tgcgtggagctcctggtgcagagaggagccgacctgttcgccgagaacgaggaccgcgag
acgccgtgtgaccgcgccgagcagcggcgccacgaggagctggccctgagcctggagtca
cagatggtcttctccctggcgcccgaggccgaggaggccgagtacgcagcgctggaccgg
agagagctgtatgaaggcctgcgccctcaggacctccggaggttgaaggacatgctgata
gtggagacagccgacatgctgcaggcgcctctcttcactgcagaggctctgctccgtgcc
catgactgggaccgagagaagctcctcgaggcctggatgagcaactcgggggaatgctgc
cagcgctccggggtccagatgcccaacccgcctcccagtgggtacaacgcctgggacacg
ttgccctcgccgcggacgccgcgcgccacgcgctgctccgccaccacctcgccacaacaa
gtcagcctgctgcccgccggcgaggaggcgtctctggtgagaggcgccgcggcttccctt
tcgcccaaatcatgttacacggtcgtcatcagattggctgtggatgtcctccctgctcct
ccctccctcaggttcctcaatctgaagatccaggagggcgacgcccacaacatctcctgc
ccggccgtcggctgctaccagctggtgccggtggacgtcatcgagagcgtggtgtccaga
gagatggaccggcgctacctccagtttgacatcaaggccttcgtggagaacaacccggcg
atccgctggtgtcccgaggccggctgtgagagggcggtgaggctgagcggccgggggacc
gccgaccccctggggttcccccgcctccgggctccggctgtagactgtggcaaaggacac
ctcttctgctgggagtgtcaaggcgaggcccatgagccctgtgactgcctcacctggagg
tcgtggcagcagaaagtctctgagatgagacccgatgaactggccggggtgagcgacgcc
tacgaggacgccgccaacagcctgtggttgctctccaactcaaagtcctgcgccaactgc
aagtctccgatccagaagaacgagggctgcaaccacatgcagtgtgccaagtgtaagtac
gatttctgctggatctgtctggaggagtggaagaagcacagctcgtccacgggaggctac
taccgctgcactcgctacgaagtcatccagcaggtggaggagcagtccaaggagatcacg
gaggaggcggaacagaagcacaagagctttcaggagctggaccggttcatgcactacttc
acccgcttcaagaaccacgagcacagctgccagctggagcagcggctgctgaagaccgcc
acggagaagatggagcagctcagtcgagctctgagaggaagggaaggcggcccgcccgac
acgaccttcatcgaggatgccgtcctagaactcctgaagactcggcgcatcctgaagtgc
tcttatccttacggcttcttcctggagcccaagagcaccaagaaggagatctacgagctc
atgcagacggacctggagatggtgacggaggacctggcccagaaggtcaaccggccgtac
ctccgcacgccgcgccacaagatcatccgcgcggcgtgtctcgtgcagcagaagcggcag
gagttcctggcctcggtggccaggggagtggcccccaacgactctcctgaggcccccagg
cgcagttttgccggcgggacgtgggactgggagtatttgggcttcgcgtcagccgaggag
tacgccgagttccagtaccgacggagacaccggcagcggcggcggggagacatgtccagt
ctccggagcaacacgcccgaccccgacgactccagcgacagcatcttagacgctcaggag
gaggcagccgggcgcagacggcatctgatggctctcggttctctggacgacgacgacccg
aacatcctgctggccatccagctgtcgctccaggactcggcgatggcggagatctggtcc
gaccgcgccgtcccggccaacgccgcctcgccgggcgccgtcggcgcctcgccgccctcc
cggctggagcaaagcgctccgggggcggagctcctctccagggcagctcggagcggctcg
gagaggctggacctgggggacaacctggcgagactcggcaacatcgacatcgacatcgac
atcgttaccgcgcagcaccgcaacggccgccggcgggcccacggggcctcggcgccgata
ccggtggcgccgggaggcagcgactcctcgacgggcctcttctcctcgtccagcgacacg
ttggactgcaccacgggcgccggccacgacccgtccacgtcctccgccgcggtggccgac
gctcgtctgctgggcaacatcgtggcgtggttccacgacatgaatcctcgaggcgtcgcc
ctggtgcccccgacctcctccgacaccgacgccgacctgcaggagggcgggggcgggaaa
ccccaggaagtggcggcggaagtgggtttcgtctctcggagaccacgcggcatgaggatg
gaggaggaggaggagcagtgcgccgtcgcccagaggccgacgcagctggacctcgagccg
ctccccctcacggctctcgaccacgccgagcagggcggctcgaaggtccggcgcgtcgac
acgccgcagtgtgactcgggatccgacacgctgctcagcaccagctcctccgagtgggag
gaccaggaccaggtgcacctggtctga
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