Pseudoliparis swirei (Mariana hadal snailfish): 130212606
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Entry
130212606 CDS
T09868
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130212606 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130212606 (msi2b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130212606 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
130212606
NCBI-ProteinID:
XP_056299631
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Position
3:11401512..11641512
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AA seq
423 aa
AA seq
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MEGDGSQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVTAAAVAAARGSGRGARGRGGYLAYPQSTGPGLPDYGFYSTPSDQRGGP
CSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKNPGNKQTNPSPLYKRNNLCA
NPSRPGGFPGANSPGPVADLYGPSSQDSAVGNYISAASPQPGSGFGPSITGPLIATAFTN
GYH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatccggaagcctaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagtaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgc
tcaagaggatttgggtttgttacgtttacagatgctgccagtgtagataaagtcttagct
caacaacaccacgaattagactcaaagacgattgatcctaaggttgcctttccacgtcgc
gcccagcctaagatggtcacaagaacaaagaaaatttttgtgggtggattgtcagccaac
acagtagtggaagacgtgaagcagtatttcgaacagtttgggaaggttgacgatgccatg
cttatgttcgataagacgaccaacagacatagaggatttggcttcataacttttgagagt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataacaaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggtacacgagggcgagcc
cggggtctgccctacaccatggatgccttcatgctggggatgggcatgctgagctaccct
aatattgtggcaacgtacggccgcggatacactggattcgcaccgagctacagctaccag
ttccccggcttcccagcgacagcatacggaccggtgacggcagcggcggtagcggcagcg
cgtggctcaggtaggggggcccgtggaagaggcggctacttggcgtacccacagagcaca
gggccaggcctccccgattatgggttttactctacacccagtgaccagaggggggggccc
tgctcctttgctgactatggctccctggggccccaagcggctcagatgctgcacagtgag
catgccacctccgcctgcaactcccccctccagcacctacacagcccggatcaatttaag
aacccaggaaacaaacaaacaaatccctccccactttataaaagaaacaacctatgcgcc
aacccgtcaaggcccggaggtttccctggtgccaacagtccagggcctgtggctgacctg
tacggaccgagcagccaggattcagctgtgggcaactacatcagtgccgccagccctcag
cccggctccgggttcggccccagcatcacaggcccgttgattgcgacagcttttacaaat
ggataccattga
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