Pseudoliparis swirei (Mariana hadal snailfish): 130212609
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Entry
130212609 CDS
T09868
Symbol
mindy3
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130212609 (mindy3)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130212609 (mindy3)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
130212609 (mindy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
Mus7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
130212609
NCBI-ProteinID:
XP_056299635
LinkDB
All DBs
Position
22:complement(11689920..11709515)
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AA seq
455 aa
AA seq
DB search
MSDLNKEVVDLVWGRPSRGVVSASIFRRWTQGFSFCENEQTALEQFEGGPCAVLAPVQAF
LLKNILFNRESSNWRKMTEEEQKAALCSTLSEILESACSSPSNGFCLVTWAKGQSPHTST
HTNTQSQTQKWDLPVPESSQPPQEQQQQPTPEDLGFERFHSALHKRTVMSVSSLREEVLS
LYHTWRGCCGVLLFLYSVILTKGIENIRNEIQDTMEPLIDSVHGHGSQSFVNLLVTGHAV
SNVWDGDRECSGMKLHGIYKQVSVGFLTLMESLRYCKVGTFLKSPKFPIWILGSETHLSV
FFAKEMSLVCPESPSEQARRVFQSFDPEDNGFIPDSLLEDVMKALDLVSEPEYVSLVKSK
LDPESLGIILLGPFLLEFFPDQDSGIPDSFPVYHYNGLKQSNHNDRVEYVEGTALVLGFE
DPMVRTDDTPVKRCLQTRWPYIELLWTTDRSPSLN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttaaataaagaggtggtggatctggtttgggggagaccctctcgtggagtt
gtgtcagcctccatcttccgtcgatggacccaaggattttctttttgtgagaatgagcaa
actgcactggagcagttcgaaggaggtccgtgtgctgtccttgcacctgtccaggctttc
ctcctaaagaacattctcttcaacagagaaagttccaactggagaaagatgacagaggag
gagcagaaagcagcactgtgttccacgctgagtgaaatccttgagtctgcttgctccagc
ccctccaatggtttctgtctggtgacttgggccaaaggacaaagcccacacactagcaca
cacactaacacacagtcgcaaacacaaaagtgggacttgccggtgccagagagcagccag
ccgccacaggaacagcaacagcaacccactcctgaggaccttggttttgagcgatttcac
agtgctctccataagcggaccgtaatgtcagtgtctagtctcagagaggaggtgttgtcc
ctctaccacacctggagggggtgctgtggagtcttgctattcctctactctgtcatttta
accaagggaatagagaatataagaaatgagatccaggacacaatggagcctctcatagac
agcgtgcatggccatggcagtcagagctttgtgaacctgcttgtaactggccatgctgtt
tctaatgtctgggacggagacagagaatgctctggcatgaaactgcatggtatttataaa
caggtatcagttggcttcctgacgctgatggaatctctccgctactgcaaggtcgggaca
ttcctcaagtctccaaagttccctatttggattcttggcagtgaaactcacctctctgtg
ttttttgccaaggagatgtccctggtatgtccagagtctccatcagaacaggcaaggagg
gtcttccagtcctttgatcctgaagataatggcttcatcccagattctctgctggaggac
gtgatgaaagcccttgaccttgtctccgagcctgaatatgtcagtctggtgaagagtaaa
ctggatccagagagtttgggaattattcttctgggcccgttcctgttggagtttttcccc
gatcaggattcaggaatccccgactcattccccgtctaccactacaatggactgaaacag
tccaaccacaacgatcgggtggaatatgtggaagggacggctttggtgctgggttttgag
gaccccatggttcggacagacgacactccagtcaagcgctgcctccagaccaggtggccc
tacatcgagcttctgtggaccaccgaccgctccccgtcactgaactag
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