Pseudoliparis swirei (Mariana hadal snailfish): 130212618
Help
Entry
130212618 CDS
T09868
Symbol
hacl1
Name
(RefSeq) 2-hydroxyacyl-CoA lyase 1 isoform X1
KO
K12261
2-hydroxyacyl-CoA lyase [EC:
4.1.2.63
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130212618 (hacl1)
Enzymes [BR:
pswi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.63 2-hydroxyacyl-CoA lyase
130212618 (hacl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
130212618
NCBI-ProteinID:
XP_056299669
LinkDB
All DBs
Position
22:complement(10888535..10898577)
Genome browser
AA seq
576 aa
AA seq
DB search
MDEVTGAQLIAESLKAQNVEYMFGIVGVPVIEVAMAAQAAGIRYVGMRNEQAACYAASAI
GYLTGRPGSCLVVSGPGLIHALGGMANANMNCWPVVVIGGSTDQSLETAGAFQEFPQVEA
CRLYSKFSARPSSLEVIPSVIEKAVRTSMYGRPGACYVDIAGDMVNARVDRSKVRVVSCC
PSPPVSLAHHGAIAEALSVLRAAQRPLVIIGKGAAYGRAETALREFVEITGLPFLPTPMG
KGVLPDDHPNCVAAARSRALLEADVVLLFGARLNWILHFGLPPRFNPNVKIIQVDLCAEE
MGNNVSPAVALLGDVNAIVIQLLEVLHKDGWKYPSATEWWSTLKDKIVTNAKISKALALQ
STLPMNYYTVFHHISQLLPHDCIIVSEGANTMDIGRTMLNNRLPRHRLDAGTFGTMGVGL
GFAIAAACVERSEQSNQRIVCVEGDSAFGFSGMEVETMCRYNLPVIIIVVNNNGIYNGVD
VETWKEMAKMGDLTSIAPPVTLLPEARYDEVMTAFGGRGFLVRTVEELRSALQLSLSDWE
RPSLLNVLIEPSSDRKPQVTVTCREYIFPVILRSTG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtgacaggagctcagctgattgccgagtctctaaaagctcagaatgtggag
tacatgtttgggatagttggtgttccggtcatagaggtggccatggcagctcaggctgca
gggatcagatatgtgggaatgcgcaacgaacaagcggcgtgctatgcggcatctgccatt
ggatacctcactgggagaccaggttcctgcctcgtggtgtctggacctggactcattcat
gctctgggtggaatggccaacgctaacatgaactgctggcctgtggttgttattggaggc
tccacagatcaaagcctggaaacagcaggagcctttcaggagtttcctcaggtggaagca
tgccgcctttatagcaagttttctgcccgacccagcagtctggaagtgatcccttcagtg
atagagaaggcagttcgcaccagcatgtatgggcgtccaggtgcgtgttatgtggatatt
gcaggggacatggtcaatgctagagtggacaggagcaaagtcagagtggtttcctgctgt
ccgtctccacctgtgagtttggctcaccacggtgcaatcgcagaagccttgtctgtcttg
agagcagcgcaaagacccttagtcatcattggcaaaggagcagcttatggccgagcggaa
acggccctaagggagtttgtggaaatcactggtctgccatttctgcccacccccatgggg
aaaggggtcctacctgatgatcaccccaactgtgtggcagctgcccgctcgagagctctt
ctcgaggctgatgttgtgctcctgttcggagccaggctgaactggatcctacattttggt
ctgccacctagattcaacccgaatgtcaagatcatccaggttgacctttgtgctgaggag
atggggaacaacgtgagccctgctgttgctctcctgggagacgtcaacgctattgtcatc
cagctgctggaggtcctccataaagatgggtggaaatatccctctgctactgagtggtgg
agcacactgaaggataaaattgttactaatgcaaaaatatcaaaggcactcgctctacag
tcaacactgcccatgaactactacacagtgtttcatcacatctcccagctattgccacat
gactgtatcatcgtcagcgagggagccaacactatggacattggacgcactatgttgaac
aaccgcctccctcgacacaggctggatgctggcacgtttggaacaatgggagtcggcctt
ggctttgctatagcagcagcctgtgtggagaggagtgagcagtcaaaccaaaggatcgtc
tgtgtggaaggagacagtgcctttgggttttctggcatggaagttgaaaccatgtgcagg
tataatctacctgtgatcatcattgtggtcaataataatggaatttacaacggagtggat
gttgagacgtggaaagaaatggcaaaaatgggagatctgacctctattgcccctcccgtg
accctcctacctgaggcacgctatgacgaagtcatgacagcgtttggaggtcgtgggttc
ctggtgaggacggtggaggagctgcgcagtgctttacagctcagcctgagtgactgggag
aggccaagtctcctaaatgtgctcattgagccttcctccgacagaaaaccgcaggtaact
gtcacttgtcgggaatatatattcccagtcatcctcagaagtacaggttaa
DBGET
integrated database retrieval system
