Pseudoliparis swirei (Mariana hadal snailfish): 130212650
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Entry
130212650 CDS
T09868
Symbol
tlr21
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pswi04054
]
130212650 (tlr21)
Pattern recognition receptors [BR:
pswi04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
130212650 (tlr21)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
LRR_EndoS
LRR_6
DHU1_N
Motif
Other DBs
NCBI-GeneID:
130212650
NCBI-ProteinID:
XP_056299724
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All DBs
Position
22:9047086..9050413
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AA seq
966 aa
AA seq
DB search
MASLTHQLLSATVVLAAVQLISGYSFNNCIEDPSSNRQRFNCVQRRENNMTAIIHDLPRS
AINLTISLNSIYYIPKTSFVDLPNLQYLKIDNNHIRSLSIFAFKDLHQLKSLNMSFNNIS
ELKHSVFQDLRNLTFLSLSNNSFKQLPEGIFSTLLNLNTLIMSQNHMTNFSGIAESVSHL
MNLRELDLSFNKLTSLSHLNVSLPKSLTTLYICRNNLFTLGCKQWFLGLIHVLDLSDNPM
LPTMAFKGLDLRRVNYLRLRSTSVKVVEFLNISNISARHVDFSGTGLNNDDRLIELCRML
KRKVKRIPNLDLGINGIENLTNNTLFYCPTITGTLDLSHNNLRNIGCLTFLNKQTYIKSI
NIEHNHLNNLQSCTTQHMVYLNNLEELSYRYNRILSVDSDAFYYTPNLKTLMLNINSIAY
LHRNALKGLTRLETLRLDNNLLTDLFNSTFEDNYNLKILNLRNNRISVIFDWNFSSLRNL
TTLDLGGNKITHVKPSGLDGLTSLSKFYLDGNNLKHIDSSLCRVFQDTLTVLDLQSNQIR
FLKEEISSPFINLSKLSDLKLDGQRPHGLTVLPHTFFRGLHSLKALYLTNNNIYQLAPDV
FDDLTGLSFMTLDNCCVGVTQLQPGVFKNLRNLTNLMLENIGIHNISKEVFGNLTQLRKL
QLNRNGMQSIRVDALESLPNLKYLDIRNTPLSCTCKNSLLQNWTVKNPYVQVVYLYNLQC
PHDATLKFYNFDTEVCYIDLGGYLFLSTAVVIFLFTVIPLLYFKLYWKMKYGYFVFRSWF
SEQWRILREKEENCKYDAFISYNSSNEQWVMEQLVPNLEGNGSSFKLCLHHRDFELGRDI
VDNIVSAVYNSRKTICVVSRDFLRSEWCSLEIQLASYRLFDEHRDVLLLVFLEEISERQV
SSYHRMRKVMLKKTYLQWPSSDCTNPTQARELFWNQLRRAMRSGSRQTEEQYSDGSKEEE
TGTVDG
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctaactcatcagctgttgtcagcaacagtcgtccttgctgctgttcagctc
atcagtggttacagcttcaacaactgcattgaagacccatcctcgaatcggcaacgtttc
aactgcgtccaacgcagggaaaataatatgactgctatcatccatgaccttccacgatct
gctatcaacctcaccatctccttgaactctatttattacattcccaagactagctttgtt
gatctaccaaaccttcaatacctcaagatagataataatcacataaggagcctttcgata
tttgctttcaaggacttgcatcaactaaagtctctcaatatgtcctttaataacatatcg
gagctcaagcattctgtgtttcaggaccttcgcaatctcacttttctctcactgtcaaac
aattctttcaagcagctccccgagggaattttctccactcttctcaatctgaacacttta
atcatgagtcaaaaccatatgacaaatttttcggggattgcagagtctgtgtcacatcta
atgaatctgagagaactagacctttcctttaacaagttgacctctctgagccatttaaat
gtgtcactacccaaatccctcacgacattatatatatgtagaaataatttgttcacatta
ggatgtaagcaatggtttcttgggttaatccatgtgctggatttgtcagacaatcccatg
ctccctacaatggcttttaaaggactggatctgaggcgtgtaaactatctgcgtttgcgt
tcaacaagtgtcaaggtagtggagtttttaaacatcagcaatatcagtgcaagacacgtg
gatttctctggcacaggtctaaacaatgacgaccggctcattgagctttgcagaatgtta
aagagaaaagttaaaaggattccaaatttagacttaggtattaatgggattgagaatcta
acaaataacacactgttttattgtcctacaatcacagggactttggatctatcccacaac
aaccttagaaacataggttgtctgacgttcctcaataaacagacatatataaagagtatt
aacatagagcataaccatctcaacaacctccaatcctgtacaacacaacatatggtttat
ttaaataatctggaggagctgagctatcgttacaaccgcatcctctcagtcgactctgat
gctttttattacacaccaaatctcaagacgctaatgcttaacataaactccattgcttat
ttacatcgtaacgctctcaaagggctaacaaggcttgagacattgcgtttggataataac
cttttaactgatttgttcaatagtacttttgaagataattacaatctaaaaatcctcaac
ctacgcaacaatcgcatatctgtcatttttgattggaacttttcaagtctcaggaatctg
actacactggacttaggcggtaataagatcactcatgttaagccatctgggcttgatgga
ctaacaagtctgtccaaattctatctagatggaaacaacctcaaacacattgactcctcc
ctctgtcgtgtatttcaagacacactaacggtgctagatttacaaagtaatcagattcgc
ttcctcaaggaagagatcagttcaccctttataaacctcagcaaacttagtgatctgaaa
ctggatgggcagcggccgcatggcctcactgttttaccccacacttttttccgtggcctc
cactcactgaaagccctgtatctcaccaacaacaacatctatcaacttgcacccgatgtc
ttcgatgatctgacaggcttaagtttcatgacattggataactgctgtgttggggtgaca
caactacaaccaggagtctttaaaaatctgagaaatctgaccaacttgatgttagaaaat
attggcattcataacatctcaaaggaggtttttgggaatctcacacagttacgcaaactg
cagctcaaccgtaatgggatgcagagcattcgtgttgatgcactggaaagtttacctaac
ctcaagtaccttgacatacgtaatactcctttaagctgcacctgcaaaaacagcttactg
caaaactggacagtaaaaaacccatatgtgcaggtggtctatctctacaacctgcagtgc
ccacatgatgccacactcaaattctacaactttgacaccgaagtgtgttacatagatcta
ggagggtacctcttcctaagcacagcagttgtgatctttctgttcacagtcattccttta
ctttattttaaactctactggaaaatgaagtacggctactttgtgttccgctcctggttt
agtgagcagtggcgcatactcagagaaaaggaggaaaattgcaaatatgatgcatttatt
tcctacaattcctccaatgaacaatgggtcatggagcagttagttcccaaccttgaagga
aatggatcatcttttaaactgtgcctacatcacagggactttgagctgggccgtgacatt
gtggacaacatcgtctctgctgtatacaacagccgtaaaactatttgtgtggtgagcagg
gatttcctaagaagtgagtggtgttctctggaaatccaactggccagctaccgactcttt
gatgagcaccgtgacgttctcctgctggtgtttctggaggaaatctctgagaggcaggtg
tcgtcctatcatcgcatgaggaaagtcatgttaaaaaagacttatctgcagtggcctagc
tcagactgcactaacccgacacaggcccgggagctgttttggaatcagctgcggagggcg
atgagaagcgggagcagacagaccgaagaacaatacagtgacggttctaaagaagaagaa
actggaactgttgacggatga
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