Pseudoliparis swirei (Mariana hadal snailfish): 130212678
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Entry
130212678 CDS
T09868
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 16
KO
K08630
a disintegrin and metalloproteinase with thrombospondin motifs 16 [EC:3.4.24.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130212678
Peptidases and inhibitors [BR:
pswi01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
130212678
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
Pep_M12B_propep
ADAMTS_CR_2
Reprolysin_5
PLAC
TSP1_spondin
Reprolysin_2
TSP1_CCN
Reprolysin_3
ADAMTS_CR_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
130212678
NCBI-ProteinID:
XP_056299764
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All DBs
Position
22:17691975..17757373
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AA seq
1285 aa
AA seq
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MTFLRICAERRTSTRPLLLFHLFCFFSQSVLFNDGAESHQDASALLRSLNLPQHTEYEIV
SPFEVNHEGVYISHEVAHNQRRRRRRSLTGSSETDGGSETLHFRLSGLGQDFHMELREAS
ESLIAPGFTVQVLGKNGTKSLRAYHRDDLCFYQGSLRSKVNSSVALSTCTGMSGLIRTQD
ADYFLRPVSHHLAQRRNFTAPSSHQPHILYKSERDSRTEPRGHDPRVLQKRSPDSTRHDS
LHRHFVTKRSTNSRADPTASSVAGEDQRGGISHADRMEHHDNDHKHGEKQRQHFCGRRKK
YMPKPPEEDAFILQDEYKFIPRNKRAAPIKNQANQKLNVETLVVVDRKMMDNHGHENITT
YVLTVLNMVSSLFKDGTIGGNINIVIVGLVLLDEEQDGLVINHHADHTLNSFCHWQSTLG
GREGRHHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFTIAH
ESGHNFGMVHDGEGNVCKKSEGNIMSPTLAGHNGIFSWSDCSRQYLSRFLNSAQAVCLSD
EPRAVKEYRYPEKLPGELYDADTQCKWQFGEKAKLCTLNFKKDICKALWCHRVGRKCETK
FMPAAEGSACGPDMWCRRGQCVKQGDEGPRPQHGQWSEWSAWSACSRSCESGVTYRERQC
NNPRPAYGGRFCEGSFRSYKLCNTEDCPPNTTEYRAQQCAEFNGKQFRGWYYSWRPYTRV
DDQDVCKLYCFAEGYDFFFALASKVKDGTLCSQDSSNVCIDGLCEKVGCDRALGSSAVPD
ACGLCSGDNSTCKIYKGQYSKQHYTNQYYGVVTIPGGARSIRVMELNTSSSYLAVRDTQR
RYYLNGRWTVDWPGRHPIAGAVFEYKRPYNRPESLISTGPTNETLVIEILLQGRNPGVRW
EYTLKKTDEKRNHIKHNYTWAIIRSQCSATCATGKMNTKAACYKDLRVQVNTSNCNIKSR
PATGLMPCNTQPCPASWSVGEWGGCSLSCGGGEQTRQVQCVQRTSQTNVDTAADSRCARA
PPATRQACSTHSCPPLWTTGPWSQCSRKCGSGLKKRTVLCTSADPAAQTLTDSLCAGPSK
PSSQETCFIKRCQKQRKVQWFVSTWQECSVTCGRGSQTRFIKCAEKDTAGKYRELAAKKC
HHVPKPTVELLRPCIPAECPVRTTPPVHRWSMHHLTHPPQPLPPPLLQAEWHSSPWSQCT
VTCGGGVQARTIQCLVQGKPSPGCALHLKPSMSQACNTNFCPQPEKKDLACRDYFNWCYL
VPQHGVCNHKFYGKQCCQSCSNSNL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgactttcctgcggatctgtgcagagcggagaacctcgacgcggccgttgctccttttt
cacctcttttgctttttcagtcaaagcgtgctcttcaatgatggtgctgagtctcaccaa
gacgcgtcggccctgctccgatccctcaatttacctcaacacacagaatatgagattgta
tctccctttgaggtcaaccacgaaggcgtttacatctctcacgaagttgcccacaaccag
cgcagaaggcgacgcagatccttgactggctcatcagaaaccgacggtggcagtgaaacg
ctccacttccgactgagtggcttggggcaggacttccacatggagctgagggaggcctcc
gagagcctgattgcacctggcttcaccgtccaagtcctgggaaagaatggcacaaagagc
ctgagggcctaccaccgggacgacctctgcttttaccaggggtcgctgaggtcaaaggtc
aactcctctgtggcattgtccacatgcacgggaatgtcaggtttgatcagaacacaggac
gcagactacttcctgagacccgtgtcccaccacttggcccagagaaggaacttcacagca
ccctccagtcaccagccacacatcctctacaagagcgagagggactcccgtacggagccg
agaggtcacgacccccgggtgcttcagaagagatccccggattcaactcgtcacgactca
ctacaccgacactttgtcaccaagagatccacaaactcacgggcggaccccaccgcctcc
agcgtggctggtgaagatcaacgaggtggcatcagtcacgcggaccggatggagcaccat
gacaatgaccacaaacacggggagaagcagaggcaacacttctgcgggagacggaagaaa
tacatgcccaaacctccagaagaggacgcctttatcctccaagatgagtacaagttcatc
ccgaggaacaaaagagcggcgccaataaagaaccaggccaatcagaagctcaacgtggag
acgctggtggtggtggacagaaagatgatggacaaccacggtcacgagaacattaccaca
tatgttctcactgtgcttaatatggtctccagtctcttcaaagacggtacaatagggggg
aacatcaacatcgtgatagtcggccttgtgcttctagatgaagagcaggatggtttggtg
atcaatcaccacgcagaccacacgctgaacagcttctgccactggcagtccactctggga
ggcagagagggccgacaccacgaccacgccatcctgctcacggggctcgacatctgctct
tggaagaatgaaccctgtgacactctcggttttgctccaattagtgggatgtgcagcaag
taccggagctgtaccattaatgaggacacaggcctgggtctggcgttcactatcgcccat
gaatctggacacaattttggaatggtccatgatggggaagggaacgtgtgtaagaagtca
gaaggcaacatcatgtctcccacgttagccggtcacaatggtatcttctcctggtcggac
tgcagccgccagtacctcagccgcttcctcaattctgcccaggctgtgtgcttatcagat
gaaccccgagcggtcaaggagtatcggtaccccgagaagctgcctggcgagctgtatgat
gcagacacacagtgtaaatggcaatttggggagaaggccaaactctgcaccctgaacttt
aagaaggatatctgcaaggctctgtggtgccaccgtgttgggaggaagtgtgagaccaag
ttcatgccagctgctgaaggctctgcctgcggccctgatatgtggtgtcgtaggggccag
tgtgtaaagcagggcgatgagggcccgaggcctcagcatggccagtggtccgagtggtcg
gcctggtctgcctgctcgcgaagctgcgagagcggagtcacctatcgagagcgccagtgc
aacaacccgagacctgcatatggagggaggttctgtgagggctccttcaggtcatacaaa
ctgtgcaacactgaggattgtccccccaacactaccgagtacagagcgcagcagtgtgcc
gagttcaacggcaaacagttcagaggatggtactacagctggaggccgtacaccagggtg
gacgatcaagatgtctgtaagctgtactgctttgctgagggatatgatttcttctttgcc
cttgccagcaaagttaaggatgggacactctgctcacaggacagctctaatgtctgtatc
gacggactgtgtgagaaagtgggctgtgaccgtgctttgggctcctcggctgttcctgac
gcttgcgggttgtgtagtggagacaactccacctgtaagatctacaaaggacagtacagc
aagcagcattataccaaccagtactatggggtggtaaccatcccaggaggagctcggagt
atccgcgtgatggaactgaatacgtccagctcctatctggccgtcagggacacccagaga
cgctactacctgaacgggcgctggacggttgactggccaggccgacacccaatcgctgga
gctgtttttgagtacaagagaccctacaacagaccagagagcttaatatcaactggcccc
acgaatgagacactagtcatagagatattgttgcagggcaggaacccaggtgtacgctgg
gaatacactctaaagaaaactgatgagaaaaggaaccacatcaaacacaactatacatgg
gccatcatacgctcccaatgctcagcgacttgtgccacgggtaagatgaacaccaaggca
gcctgctacaaagacttgagagtgcaagtgaatacatccaactgcaatatcaaatcaaga
ccggctactggactgatgccctgcaacacccaaccatgccccgccagctggtctgtagga
gagtggggggggtgcagtctgagttgtggaggaggggagcagacgcggcaggtccagtgt
gtccagagaaccagccagaccaacgtagacaccgcggccgactctcgctgtgcccgggcc
cctccggccacgaggcaagcctgcagcacacacagctgtccaccgctctggaccaccggg
ccatggtcacagtgttctcgtaagtgtggcagcggcttgaagaagaggacggtgctgtgt
acgagcgccgacccagctgcccagacgctgacagacagtttgtgtgccggcccgtcaaaa
cccagcagtcaggaaacctgtttcatcaagcgctgccagaaacaacgcaaagtccaatgg
tttgtctccacgtggcaagagtgttcggtaacatgtggccgtggctctcagacacgcttc
atcaagtgtgcagagaaggacactgcaggaaagtacagagagctcgctgccaagaagtgc
caccacgtccccaagcccacagtggagctcctgaggccctgcatcccggccgagtgcccc
gtccgcaccacgccaccggtccaccgatggagcatgcatcatctcacccatccacctcaa
cccctccctccacctctgcttcaagcagaatggcactcgtctccttggtctcagtgcacg
gtgacgtgtggtgggggagtgcaggccaggacgatccaatgtctggtccaagggaagccc
tctcctggctgtgccctccatcttaaaccctcaatgtcccaggcctgcaacacaaacttc
tgcccgcaacctgagaagaaagaccttgcatgtagggattacttcaactggtgttacctg
gtgccccagcatggagtctgcaaccacaagttctatggaaagcagtgctgtcagtcatgt
tcaaattcaaacctataa
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