Pseudoliparis swirei (Mariana hadal snailfish): 130212735
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Entry
130212735 CDS
T09868
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130212735 (rnf115a)
04121 Ubiquitin system [BR:
pswi04121
]
130212735 (rnf115a)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130212735 (rnf115a)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130212735 (rnf115a)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130212735 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
C1_2
zf-C3HC4_3
HypA
Motif
Other DBs
NCBI-GeneID:
130212735
NCBI-ProteinID:
XP_056299871
LinkDB
All DBs
Position
22:complement(13403680..13410383)
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AA seq
326 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGVANGIDDAAT
QFAEVEADLTDFGENWLWHLLLERPFTADGDTPDSERRLPGGRLGGLSALGGLGGGPIGG
SVPAGLGGPMGGLLGAGDHWGQGRPSRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLF
ANSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPT
VNISQEQADCCMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSLNG
EDSSSQPPSESPTLSMDPRTQERWSF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttccaccgcatcggtttttctgtcactgttgtaagggagaa
gtgaatcctaaactcccggagtatatctgtccaagatgtgactcgggattcatagaggaa
gtaacagaagattccagtcttctagagggtgtcgctaacgggatagatgacgctgccaca
caatttgcagaggtagaagctgacttgacggattttggagagaattggctatggcacctg
ttactggagcgaccgtttacagcagacggtgacacacctgactcagaacgtcggctccct
ggaggacgcctggggggtctcagtgccctgggagggttgggagggggaccaatcgggggt
tcggtcccagcaggcctcgggggacctatggggggtctactaggagccggagaccactgg
ggacaaggacgtccctctcgcttgcacagccagaggagataccggtccagaggcagcagt
agaccagaccgctcgcccgctgtggaggggattgtgcaacagtttctcgccggcctcttt
gccaactctggagtccctggctcaccccccctctcatggacggggatgctgcactctaac
ccaggcgattacgcctggggacagggagggttagacgccgtgataacgcagttactaggt
cagttggagaacacaggacctcctccagcagagaaagagaagatctcttctctcccaact
gtcaatatctctcaggaacaagcagactgctgtatggaatgtccggtgtgcaaagaggac
ttcgcagtgggagagccagtcagacagctcccctgtaaccacttctttcattcagactgt
atcgtaccatggctggaaatgcatgacacatgtccagtgtgtaggaagagtttgaacgga
gaagacagcagcagccagcccccatcagagtcccccaccctctccatggacccccgcaca
caggagagatggtccttctga
DBGET
integrated database retrieval system
