Pseudoliparis swirei (Mariana hadal snailfish): 130212744
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Entry
130212744 CDS
T09868
Symbol
efna1b
Name
(RefSeq) ephrin-A1b
KO
K05462
ephrin-A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130212744 (efna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130212744 (efna1b)
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130212744 (efna1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130212744 (efna1b)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Growth factors (RTK binding)
130212744 (efna1b)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Axon guidance molecules
130212744 (efna1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Others
130212744 (efna1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
130212744
NCBI-ProteinID:
XP_056299888
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All DBs
Position
22:13140964..13151340
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AA seq
234 aa
AA seq
DB search
MDFVYLVCLALSIGAWFACAERHSVYWNSSNPNFLWDEYAVEVHINDYLDIVCPHYSHGE
VSPHAAERYVLYMVEKEDYEVCKPHSFDQLRWECSRPFAPHAPEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPMHHHGQDCLRLKVDVVGLKGSGKNNVDKSKGEDTGKSLDGGKGKFP
IAGGVHNPSNRLPADDPAVMEPKVQRSIGSSGAQLVSFSLFLTLSSVLLALMLQ
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgtatcttgtgtgtttggcgctgagcatcggtgcgtggttcgcctgtgcg
gagagacacagcgtctactggaacagctccaatccaaacttcctgtgggatgagtacgca
gtggaagtgcatatcaacgactatctggacatcgtctgcccccactacagccacggcgag
gtgtcaccgcatgcagctgagcgctacgtgctgtacatggtggagaaggaggactacgag
gtgtgcaagccccactccttcgaccagctccgttgggagtgctcgcggccgttcgctccc
cacgcccccgagaaattctctgagaaattccagcgatttactcccttcaccctgggcaag
gagttcaggcagggagagagctattattatatctccaagccgatgcatcaccacggacag
gactgtctcaggctgaaagtggatgttgtcggacttaagggctccggaaaaaacaacgtg
gataaatccaagggtgaagatacaggaaaaagcttggatggaggaaaagggaagtttcct
attgctggaggagttcacaacccctctaaccggctcccagcagacgaccctgctgtgatg
gagccaaaagttcagaggagcatcggcagttcgggagcacagctggtctccttttcactt
ttcctgaccttgagctcagtactattagccctgatgctacaatga
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