Pseudoliparis swirei (Mariana hadal snailfish): 130212754
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Entry
130212754 CDS
T09868
Name
(RefSeq) double-strand-break repair protein rad21 homolog A-like
KO
K06670
cohesin complex subunit SCC1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130212754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130212754
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130212754
BRITE hierarchy
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
130212754
NCBI-ProteinID:
XP_056299903
LinkDB
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Position
22:complement(23718762..23725908)
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AA seq
635 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFTLNQSRVEEITMREDVGNLSLLQDNDFADFGMDDREMMRDASTFEED
IMHGASASNLLLEAEPGPAALPNKSNHMEYDDFGDASLGNTDGGMLVDKLLSSEDGGGIF
DDPPAITESVLMPPDHGDDEDDFDNLQSPGSHSPDSGPVEPLPALADQTEQTTLVHNEEE
AFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLMM
WKETGGVEKLFSLPAQPLWNARLLKMFTRCLTPLVPDEMRKRRKGGEADSLDEFLKELEN
PEVPREEVLSQHRDVIDQTIMEEPSMLAASAMEGSRTTLDETAMPPPSTPRGVKRKTVDK
EAALPMAPLEPQHAAERSVLAQRLDVPQVDLPPEESSLNLSQLIPELDLLNEKSKDKKDD
SDEEDEDGQTGDQDQEEKRWNKRTQQMLHGLQRVMAKTGADSVSMLELCRNNNKKQAAAK
FYSFLVLKKQQAIEVSQTEPYSDIVATAGPRFQLI
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgcccactttgtcctcagcaaacgtgggccgctggccaagatctggctagcg
gcccactgggacaagaagctgaccaaggcccacgtctttgaatgcaacctggagagcagc
gtggagagcatcatctcaccgaaggtgaagatggcgctccgtacatcaggccacctgctc
ctcggggtggtgaggatctaccacaggaaggccaagtacctgctggctgactgcaatgaa
gccttcatcaagatcaagatggcgttccggccgggtgtggtggatctccccgaggaaaac
agagaggcggcctacaatgccatcaccctgcccgaggagttccacgactttgaccagccg
cttccagacttggatgacattgacgtggcccagcagtttaccctcaaccagagccgagta
gaggagatcacgatgagggaagacgttggaaacctcagcctcctgcaggacaatgacttc
gccgacttcgggatggacgaccgagaaatgatgcgtgacgccagcacgttcgaggaggac
atcatgcacggagcctcggcctcgaacctgctgctggaggccgagcccggcccggccgcg
ctgcccaacaagtccaaccacatggagtacgatgacttcggagacgcctccttgggcaac
actgacggggggatgctggtcgataagctgctgagctctgaggacggaggcggtatcttt
gacgaccctccggccatcacagaaagtgtcctgatgcctccggaccacggggacgacgag
gacgacttcgacaacctgcagtcgcccggttcccacagccccgactccggcccggtggag
ccgctgccggcgctggccgaccagacggagcagaccaccctggtgcacaacgaggaggag
gccttcgccctggagcccatcgacatcactgtgaaagagaccaaggcgaagcgcaagagg
aagctgatcgtggacagcgtgaaggagctggacagtaagaccatccgggctcagctgtcc
gactactccgacatcgtcaccaccctcgacctcgccccccccaccaagaagctcatgatg
tggaaggagacgggcggcgtggagaagctcttctctctgccggctcagcccctgtggaac
gcccggctgctcaagatgttcacacgctgcttgacgcctctggtgccggacgagatgagg
aagaggaggaagggtggcgaagccgacagtctggatgagttcctcaaagagctggagaac
ccggaggtgcccagagaggaggtcctgagtcagcaccgagacgtcatcgaccagaccatc
atggaggagcccagcatgctggcagcctctgccatggagggcagcaggacgaccctggat
gagacggccatgccccccccctccacccctcgcggcgtgaaacgcaagaccgtcgacaaa
gaggccgcacttcctatggcccccttggagccgcagcatgcggcggagcgctcggtgctg
gcccagaggctagacgtgccccaggtggacctgcccccagaggagagcagcctcaacctg
tcccagctcatccccgagctggacctgctcaacgagaagagcaaagacaagaaggacgac
agcgacgaagaggatgaggacggtcagaccggagaccaggatcaggaggagaagaggtgg
aacaagagaacccagcagatgctccacggcctccagcgcgtcatggccaagaccggcgcc
gactcggtgagcatgctggagttgtgccggaacaacaacaagaagcaggccgccgccaag
ttctacagtttcctcgtcctcaagaagcagcaagccatcgaggtgtcccagacggagccc
tacagcgacatcgtggccaccgccgggcccaggttccaactcatctag
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