KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130212775
Entry
130212775         CDS       T09868                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013  Nucleocytoplasmic transport
pswi03015  mRNA surveillance pathway
pswi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130212775 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    130212775 (rbm8a)
   03015 mRNA surveillance pathway
    130212775 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130212775 (rbm8a)
   03041 Spliceosome [BR:pswi03041]
    130212775 (rbm8a)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130212775 (rbm8a)
Spliceosome [BR:pswi03041]
 Complex C
  Other components
   EJC/TREX
    130212775 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 130212775
NCBI-ProteinID: XP_056299940
LinkDB
Position
22:5592436..5596989
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGFLKGYALVE
YETYKEAQVAMEGLNAQDMMGQPISVDWGFVRGAPKNKRRTGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggatcttcacgaagcgggaggagaggatttcccaatggatgaggat
ggtgatgagagcatccacaagttgaaggagaaggcgaagaagaggaaaggacgaggcttt
ggttcagaggaaggagccaggtccagaatcaaagaggactatgacaccgtggagcaggac
ggggacgagcccggccctcagagatctgtggagggctggatcctgtttgtgacgggtgtc
cacgaagaggccacagaggaagacatccatgacaagttttcagagtttggagaaatcaag
aacctgcatctcaaccttgaccgcagaacaggcttcctcaagggatatgcactggtggag
tacgagacctacaaagaggcccaggtagccatggaagggctcaatgctcaggacatgatg
ggtcagcctatcagtgttgactggggatttgtcagaggggcccccaagaacaagaggaga
actggcggccggagacgcagcagaagcccggacaggaggcggcgttga

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