Pseudoliparis swirei (Mariana hadal snailfish): 130212776
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Entry
130212776 CDS
T09868
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130212776 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130212776 (prpf3)
Spliceosome [BR:
pswi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130212776 (prpf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF6396
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
130212776
NCBI-ProteinID:
XP_056299942
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Position
22:13516021..13522550
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AA seq
709 aa
AA seq
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MSLPKREVEEMRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTADQLRPFLDESAG
GFVECLFEALEESRNSRGNKGAGEKHRKRDLKDVFGDMAEIAVVRETPEIKDVPAPKRKR
VPRFEEVEEPEVVPCPPAESPSMLTKLQIKQMMEAATKQIEERKKQLSFSSAVPAAQGLS
FLQSQLEISPVSRLLGTSTAAGGGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLA
MKPGILGALGNLGAHNLVALANLHAMGIAPPKVEIREVNKPTPLILDDKGRTVDASGKEV
ELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVTITPAQRLRRGFKFHDQ
GRFEKIAQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKLIGDGTVPHIEWWDS
YILPYNIDISLETSFEDLELFGVTNLVEHPAQINPPVDTDKPVTLGVYLTKKEQKKLRRQ
TRREGQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKVH
EDANAARKLTAEQRKEKNVKRLKEDLSDGVHIAVYRIRNLHNPAKKFKVEANANQLYLTG
TVVLHRDVNLVVVEGGPKSQKKFKKLMLHRIKWEEHNSKRDDPDADDETKRNNKCWLIWN
GTAKERNFGEMKFKQCPTENMAREHFKKHGTEHYWDLALSKSVLDNPDD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtcgaggagatgaggccatgggtggagcggactgtgaag
aaggttctgggtttctcagagcccacagtagttactgctgctttgcactgtgtcggaaaa
ggactggacaaaaggaagaccgcagaccagctacgtcccttccttgatgaatctgctgga
ggttttgtggagtgtctttttgaagctttggaggaaagccgcaattcacgaggcaacaaa
ggagcaggagaaaagcaccgcaagagagacctcaaggatgtttttggtgatatggctgaa
attgctgtcgtacgagaaactccagagataaaagatgtgccagcaccaaagaggaaacgg
gttcctcgcttcgaggaggtagaggaacctgaggttgtaccgtgtcctccagctgagagc
cctagcatgctcaccaaactgcagataaaacagatgatggaagcagctacaaaacagata
gaagagaggaagaaacaactcagcttttcctctgcagtccctgcagcacaagggttgtcc
tttcttcagtcacagctggaaatctctccagtctcacggcttctcggcacatccactgct
gcaggcggaggtggtgcctcgtctattgctccatcgcaggctgccagctttatgaatgat
gctatcgagaaggcccgcaaggctgctgaacttcaggcccgcatccagtcccagttagcc
atgaaacctggtatcctcggcgccctgggaaacttaggggcccacaacctagtggcacta
gctaatttacacgccatgggaattgccccaccgaaagttgaaatcagggaggtgaacaag
ccaactcctcttattctggatgacaagggaagaactgtggatgcaagtggcaaagaggtt
gaactcacacaccgcatgccaacactgaaagctaacattcgagcggtaaagagggagcag
ttccgtcagcagctgaaggagaagcccggggaggacttagagtccacgtcctacttcgac
caacgtgtgaccattacaccagctcagcgccttcgcaggggcttcaaattccatgaccaa
gggcgcttcgagaagattgctcagagaataagaactaaggcccagttggaaaggttgcag
aatgagattgcccaggcagcaaagaagacaggaatccaggcatccaccaagctggcactg
attgccccaaagaaattgattggagacggcacggtgccccacattgagtggtgggactcc
tacatcctgccctacaacatagacatatcactcgaaacatcatttgaagacttggagctc
tttggtgtgaccaatctggtagaacatcccgcccaaatcaaccctccagttgacacagat
aagccggtaacgctgggcgtttacctgactaagaaagaacagaagaaactaagaagacag
acacgtagggagggacaaaaagaagtccaagagaaggttcgtctgggactgatgcctcca
ccagaacccaaagtgcgcatctctaacctgatgagagtgctggggacggaggccgttcag
gaccccacgaaggtcgaggcccacgtcagagcacagatggccaagagacagaaggttcat
gaggatgccaatgcagcccgcaagctcacagcggagcagaggaaagagaagaacgtcaag
aggttaaaagaagacctcagtgatggtgttcacattgcagtgtacaggatccgtaacctg
cacaaccctgctaagaagtttaaagtggaggccaatgccaaccagctgtacctgacgggc
actgtcgttctgcacagagacgtcaaccttgtggtggtggagggaggccctaaatcccag
aaaaagttcaagaagctgatgttgcatagaatcaaatgggaggaacacaacagtaaaaga
gatgatccagatgctgatgatgaaacgaagaggaacaacaagtgctggttaatttggaac
ggcacagctaaagagcgtaattttggggagatgaagttcaagcagtgcccgacagagaac
atggccagagaacacttcaagaaacacggcacagaacactactgggatctagccctcagc
aagagtgtgttggacaacccagatgactga
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