KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130212791
Entry
130212791         CDS       T09868                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04068  FoxO signaling pathway
pswi04136  Autophagy - other
pswi04140  Autophagy - animal
pswi04621  NOD-like receptor signaling pathway
pswi04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    130212791 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130212791 (atg12)
   04136 Autophagy - other
    130212791 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130212791 (atg12)
   04622 RIG-I-like receptor signaling pathway
    130212791 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pswi04131]
    130212791 (atg12)
   04121 Ubiquitin system [BR:pswi04121]
    130212791 (atg12)
   03029 Mitochondrial biogenesis [BR:pswi03029]
    130212791 (atg12)
Membrane trafficking [BR:pswi04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    130212791 (atg12)
Ubiquitin system [BR:pswi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   130212791 (atg12)
Mitochondrial biogenesis [BR:pswi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    130212791 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 130212791
NCBI-ProteinID: XP_056299975
LinkDB
Position
22:complement(14357727..14360146)
AA seq 117 aa
MADTAESQVETKKEKSQPPSEDSTTADDKKKIDLLLQAVGATPIMKTKKWSVERGRTIQS
LSQFISRYLKLDGSEQLFIYVNQSFAPSPDQDVGVLFDCFGSDGKLILHYCNSQAWG
NT seq 354 nt   +upstreamnt  +downstreamnt
atggctgacaccgctgagtcccaagtagaaacgaaaaaagagaagtcacaaccgccttcg
gaggattcaacgacagctgatgataagaaaaaaattgatttgctgctccaggcagtcgga
gccactcctataatgaaaaccaagaagtggtccgtagaaagggggaggacgatacagtcc
ctgtctcagttcatctctcgttacctcaagctggatggcagtgaacaactgttcatttat
gttaaccagtcatttgccccctcaccggatcaagacgtcggggtcctttttgattgtttt
ggcagcgatggaaagctcattctgcattactgtaattctcaagcctggggttga

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