Pseudoliparis swirei (Mariana hadal snailfish): 130212803
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Entry
130212803 CDS
T09868
Name
(RefSeq) zinc fingers and homeoboxes protein 1-like
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130212803
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130212803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
HTH_71
Motif
Other DBs
NCBI-GeneID:
130212803
NCBI-ProteinID:
XP_056299991
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Position
22:complement(22159540..22172091)
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AA seq
903 aa
AA seq
DB search
MSSRRKSTTPCMVLPADAAEEKTQRTEEEVEEVEEVEEEEEGKEGAEELDQAVLVVPTPP
DTDEPGVSAADGGGVLAPSLRRGAATPPSHLGSDRPERACDAPEEGGADPAAMAAISLSK
TPIMRMKTKSEPKRIAVSLKAPDEAAEGFGRGGEGDAEAEQEPIEAPLGPTMTPVEMLLH
DAVKLGGGGLLVGHYSEQQRKASALNPSVLPAGLAQVLSAFQAQQSAIAAAQSQLLIPLS
SIPSYSAAMDNNPLLGNTYKRFPYPSMAEINGLAAQTQFTEEQIKVWFSAQRLKHGVSWT
PEEVEEARRKQFNGTVHSVTQTITVIPAHQLSAAANGLQSILQTCQIVGQQGLVFTQVGP
GGHLPVTSPITLTVAGLPSQSQSSSRVSCQPAATNSELKRATTIQPPSLSPQENSALSAD
TFGLRPKKSKEQLAELKASYLENHFASDAEISRLMKITNLTKGEIKKWFSDTRYNQRNSK
NSNVIVFHDGGGGSIVIDSSDETPTSPHAPRTPPVKDKETRSKSWNPFPDFTLQKFKEKT
PEQLVVLEESFEKCVTPSDEELSRLRTETKLTRREIDAWFTERRKTPPLGTPSPDSSEGG
KMEADGAKAGGVSSASPSASSSRRGSQTPPGGRGKQPPTSSNKDVKDKSKKTPEQLHILK
RAFVRTQWPTPEEYDQLAEESGLLRSYIVSWFGDSRYSWKNSNLKWFFQYQSGTTEGPNG
GGGNKMGGGGSGTGRKRRGRNRGWGRSRTRRQPRRSASSGADVDGSPPTKKFKTGREILK
EYYVKHRFLNEQDLDELVTKANMSYEQVREWFAEVQRRLDAGADPFLEADATGKAADGAA
AGARGEVSAAGEEQTATGMGDEEDEDEGDEEEEEEDGGGDDTDDSEVWEPSRSVRKSLSV
SED
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgccggaaatccaccacgccgtgcatggtgctgcccgcggacgccgcggag
gagaaaacccaaaggacggaggaggaggtggaggaggtggaggaggtggaggaggaggag
gaggggaaagagggagcggaggagctggaccaggcagtgctggtggtgcccacccctcca
gatacagacgagcccggcgtctcggccgcggacggcggcggcgtcctcgctccgtcgctg
aggcgcggcgccgcgactcctccctcgcacctcggcagcgaccggccggaacgagcgtgc
gacgcgcccgaagagggaggcgcagaccccgcggccatggccgccatctccctcagcaag
acccccatcatgaggatgaagaccaaatcggagcccaaacgcatcgccgtgtccctgaaa
gcgccggacgaggcggccgagggcttcgggaggggcggcgagggcgacgcggaggcggag
caggagcccatcgaggcgccgctcggcccgacgatgacgcccgtggagatgctgctgcac
gacgccgtgaagctcgggggaggcggcctgctggtcggccactactcggagcagcagagg
aaagcgtccgctctgaacccctccgtcctgcccgccggcctggctcaggtgctctctgcc
ttccaggcgcagcagagtgcgatcgccgcagctcagtcccagctgctgatccccctcagc
agcatcccgtcctacagcgccgccatggacaacaaccccctgctgggcaacacgtacaag
aggtttccgtacccctccatggccgagatcaacggcctggcggcgcagacgcagttcacg
gaggagcagatcaaggtgtggttctcggcgcagcggctgaagcacggcgtgagctggact
cctgaggaggtggaggaggcccggaggaaacagttcaacggcacggtgcactcggtgacc
cagaccatcaccgtcataccggcccatcagctctcggcggcggccaacggcctgcagtcc
attctgcagacctgccagatagtgggccagcaaggcctggtgttcactcaggtgggccca
ggtgggcaccttccggtgaccagccccatcactctgaccgtggcagggctgcccagtcag
tcccagagctccagcagagtttcctgccagcccgcggcaaccaacagtgagctgaaacgg
gccaccaccatccagccgccctctctatccccacaggagaactcggccctcagcgctgac
acgtttggcttgcggcccaagaagtccaaagagcagctggcggagctgaaagccagctac
ctggagaaccactttgcctcggatgcggaaatttcccgtctgatgaagatcaccaacctc
acgaagggagagatcaagaagtggttcagtgacaccaggtacaaccagcgcaactccaag
aacagcaatgtcatcgttttccatgacggcggcggcggctccattgttattgactccagc
gacgagacccccacatccccccacgctccacgcacgcctcccgtcaaggacaaggagacg
cgctccaaaagctggaacccgttcccggatttcactctgcagaagtttaaggagaagact
ccggagcagctggtggtgctggaggaaagcttcgagaagtgcgtcaccccgtcggacgag
gagctgagccgcctgagaacggagaccaaactgacgcggcgggagatcgacgcctggttc
accgagagaaggaaaacgccgcctctcggcactccctccccggattcctcggagggggga
aagatggaggccgacggcgcgaaagcaggaggcgtttcctccgcttccccttccgcctct
tcttctcgtcgaggtagtcagacgccccccggcggtcgcggtaagcagccgcccaccagc
agcaacaaagacgtgaaagacaagagtaaaaagactccggagcagctccacatcctgaag
agggccttcgtgcggacgcagtggccgacgccggaggagtacgaccagctggccgaggag
agcggcctcctccggtcctacatcgtcagctggttcggggactctcggtactcgtggaag
aacagtaacctgaaatggttcttccagtaccaaagtggcaccaccgaagggccgaatggc
ggcggaggcaataaaatgggcggcggcggaagcggcaccggtcggaaaagacgcggccga
aatcgaggctgggggcggtcccggaccaggaggcagccgagaaggtcggcctcctccggc
gcagacgtggacggatcccccccgacgaagaagttcaagaccgggagggagatcctgaag
gagtactacgtgaagcaccgattcctcaacgagcaagacctggacgagctggtcaccaag
gccaacatgagctacgagcaggtgagggagtggttcgccgaggtgcagcggcgcctggac
gcgggggcggatcccttcctggaggcggacgccacagggaaggcggcggacggggccgcc
gcgggggcgcggggggaggtgtccgcggccggcgaggagcagaccgccactgggatggga
gacgaggaggatgaggatgaaggagacgaggaggaggaggaggaggacggcggcggcgac
gacacggacgacagcgaggtttgggagccgtcacgtagcgtcaggaagtcgttgtcggtc
tctgaagactaa
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