Pseudoliparis swirei (Mariana hadal snailfish): 130212822
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Entry
130212822 CDS
T09868
Symbol
smpd5
Name
(RefSeq) sphingomyelin phosphodiesterase 5
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00600
Sphingolipid metabolism
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
130212822 (smpd5)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
130212822 (smpd5)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
130212822
NCBI-ProteinID:
XP_056300031
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Position
22:complement(11324919..11329825)
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AA seq
577 aa
AA seq
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MALQASPFPNGCVAGIHAVGWAFILPCFWFLDRLIALCKSTTPERTQRLEKECYLHPLKV
FFGSIIFFILFLVTAPLGFLGFMLWAPLQACRRPFHYHRETPASPDETHRGFELVGKASF
GFATANLCLLPDSLARFNNLGHTQHRAAVIGQHIVQGVCRPHSRIFVDSPSSCGTPSPSN
SILPTVNSSSYGAPDKHAPVSHHSDSAGVHVSIPLSNSQVTCDDTEEPSTDSPSLLLNMN
DDSNQQGRASQRSVPRASLSQGLRQQDDVPWEVSSLFPANVDILCLEEVFDKRAAKKLTQ
ALKPVFGHILYDVGVYACQPPCRCSSFKFFNSGLFLASRFLVLEAEYHCFPNSRGEDALA
AKGLLSAKVLIGQNEKQKNVVGYFNCTHLHAPEGEGEIRYEQLNLVTKWIGDFQAANKLP
DEDVAFDVLCGDFNFDNCSPDDTLEQSHCLFEDYRDPCRAGPGKEKPWVIGTLLEQPTLY
EDDINTPESLRRTLESEDLRKRYISPPVPGKDRPLVYPETGQPWIGRRIDYILYRENSVS
KHCRTEIEEVTFITQLAGLTDHIPVGLRLNVIMDSAG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcaggcatctccatttcctaatgggtgtgttgcaggcatccatgctgtggga
tgggcattcatcctgccctgcttctggtttcttgatcgtctcattgctttgtgcaagtcc
accaccccggagcgaacccagcgcctcgagaaggaatgctacctccaccccctcaaggtc
ttctttggctcgattatcttttttattctttttctcgtaacggcccctttgggcttcctg
ggatttatgctctgggcacctctccaggcttgccgcaggccctttcactaccacagagag
acaccagcctcaccagacgagacgcacaggggcttcgagttagtaggaaaggcctcattt
ggatttgccacagccaacctatgtctgttgcctgacagcctggctcgtttcaacaacctg
gggcacacccagcacagagcggctgtgattggtcagcacattgtgcagggtgtgtgtcga
ccccatagccgcatctttgttgactcccccagcagctgtggaactcccagtccctccaac
agcatacttcccaccgttaactcctcttcatatggggctcctgataaacatgcaccagtg
agtcatcactctgattcagctggagtgcatgtttcaatcccactgtccaatagtcaggtt
acctgtgatgacacagaggagccctcgactgactccccttctctgcttttgaatatgaat
gacgactccaaccagcaaggccgggcaagtcagcggagtgttccccgagcttcgctctcg
cagggtctccgccaacaggacgatgtgccctgggaagtctcgtcattgtttccagccaat
gtggacatcctgtgtctcgaagaggtgttcgataagcgggcggccaagaagctcacccaa
gcactaaaacccgtgtttggacacatactgtatgacgttggcgtgtacgcctgccagcca
ccatgcaggtgttcctctttcaagttcttcaacagtgggctgttcttagccagccggttc
cttgtgcttgaggccgagtaccactgctttcccaacagccgcggggaagacgcactagct
gccaaaggcctcctttccgctaaggtgctaatcgggcagaatgagaaacagaagaatgtg
gttggctattttaactgcacacatcttcatgcaccagagggagaaggggaaattcgctat
gagcagttaaaccttgttaccaagtggattggtgattttcaagctgccaacaaactgccc
gacgaggacgtggcttttgatgtgctctgtggagatttcaactttgacaactgctcacct
gatgacaccctggagcaaagccactgtctgtttgaggactatagagatccttgtagggca
ggtcctggaaaagagaagccctgggtcattggtactctgctggagcagcccacattgtat
gaagatgacataaacaccccagaaagtcttcgaagaactttggagagcgaggatctgaga
aagcggtacatctcccctcctgttcctggaaaagaccgacccttggtttaccctgagact
ggccagccgtggatcggacgtcggatcgactacatcctgtaccgcgaaaactccgtttca
aagcactgccgaacggaaattgaagaggttaccttcataacccagctggctggcctgacg
gaccatattcccgtgggcttgagactgaatgttattatggactctgcgggttaa
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