Pseudoliparis swirei (Mariana hadal snailfish): 130212830
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Entry
130212830 CDS
T09868
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130212830 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130212830 (washc5)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Others
WASH complex
130212830 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
130212830
NCBI-ProteinID:
XP_056300040
LinkDB
All DBs
Position
22:23779809..23792235
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAVLRIVSRGNAIIAELLRLSDFVPPVFRLKEKSEQQKHGDIICDFSY
FKGPEYYDGKLEARPELQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSSGYSTQPGAKRPANYPESYFQRVPVSSTFVSMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFSPSILHSQQAKMREIVDKFFPDNWVISVYMGITVNL
VEAWEPYKAARTALNYTLEAGNIKEQASRYAASMESLRPQVLQLLKEGFLREEIILDNIP
KLLNCLRDCNVTIRWLMLHSAESASDLNNKRLRQIRDQVLNDSKYNVKILFQLLLDTAQF
EFTLKEMFKQMLSEKQLKWESFQKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIQSLNYEDATAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRRFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTFIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQADSADLLSVSQFYSGELVSYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLNKDK
LKDFSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHRGLIFNPKAKSSELMPKLQDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRAKIQDWQSVHQSTHIPIPKFPSVDESATFIGRLCREILRITDPKLTCYV
EQLNTWYDSRSHRQVTDKRLFSEVQNTLGTFGLNGLDRLLCFTIVKELQNFLVWIQRTVL
KDKAVVDVLKVLLAVVTPVQGVVGNASKVYASAAAKTQKIWSAYLEVIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNTLLYDITAHLEAA
GIHNPLNKIYITTKRLPYFPLINFLFIIAQLPRLQYNKNQGMTCKKASDPLDWPPLVLGM
LTLLKQFHSRYTQQFLALIGQFIRSMMEQCTSQKIPDMPSDVVGALMLLEDYVKYTKLSR
KVAEAHVPSFIFDEFRTIL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctggctgagaacaacctgtgtggccaggccgtcctccggatcgtctct
cgggggaacgccatcatcgccgagctgctgcgcctctcggacttcgtccctcccgtcttc
cggctgaaggagaagagcgagcagcagaaacacggagacatcatctgtgacttcagctac
ttcaagggcccggagtactacgatgggaagctggaggcccgacccgagctccaggacctg
gacgaggagttcagagagaacaacatcgagatcctgtcccgcttctacctggccttcgag
agcgtccacaagtacatcgtggacctgaacaggtacctggatgacctgcatgagggcgtc
tacatccagcagactctggagacggtgctgctgaacgaggacgggaagcagctcctgtgt
gaggcgctctacctctacggagtcatgctgctggtcatcgaccagaagattgaaggggag
gtcagagagaggatgctggtgtcctactacagatacagcgccgctcgctcgtcggccgac
tccaacctggacgacatctgcaagctgctgcgcagcagcggctactccacgcagccggga
gccaagcggccggccaactacccggagagctacttccagcgggtccccgtcagctccacc
ttcgtcagcatggtcatcgggaggctgcgctcggacgacatctacaaccaggtgtctgcg
tacccgctcccggagcatcgcagcacggcgctggctaaccaggccgccatgctctacgtg
tgcctctacttcagcccctccatcctgcacagccagcaggccaagatgagggagatagtg
gacaagttcttccccgacaactgggtcatcagcgtctacatgggcatcacggtgaacctg
gtggaggcctgggagccctacaaggcggccaggacggccctgaactacacgctggaggcc
ggcaacatcaaggagcaggcctctcggtacgcagccagcatggagagcctgaggcctcag
gtgctgcagctgctgaaggagggcttcctccgggaggagatcatcctggacaacatcccc
aagctgctcaactgcctgagggactgcaacgtgaccatccgctggctgatgctgcactcg
gccgagtcggcctccgacctgaacaacaagcggctgcgtcagatcagagaccaggtgctc
aacgactccaagtacaacgtgaagatcctgttccagctgctgctggacacggcgcagttt
gagttcaccctcaaagagatgttcaagcagatgctgtcggagaagcagctgaagtgggag
agcttccagaaggagggctctgagaggatgacggagctggccgaggtcttctccggcgtc
aagccgctcaccagggtggagaagaacgagaacctgcaggcctggttccgggagatctcg
aagcagatccagagtctgaactacgaggacgccacggcggccggccgcaagacggtgcag
ctcatccaggccctggtggaggtccaggagttccaccagctggagtccaacctccaggtc
tgccagttcctggctgacacccggaggtttctgcaccaaatgatccgcaccatcaacatc
aaggaggaagtcctcatcaccatgcagatcgtgggagacctgtcctacgcctggcagatc
attgacagcttcaccttcatcatgcaggagagcatccgggtcaacccgtccatggtcacc
aagctgagggccacgttcctgaagctggcctctgcgttggaccttcccctgctgcggatc
aaccaggccgacagcgctgacctgctcagcgtgtctcagttctactccggggagctggtg
tcctacgtcaggaaggtgctgcagatcatcccagagagcatgttcacctctctggccaag
atcatcaagctgcagatccacgacatcatggaggtgcccacgcggctgaacaaggacaag
ctgaaggacttctcccagctgggcgctcgctatgaggtggctaaactcacccacgacatc
tccatcttcactgaggggatcctgatgatgaagaccactctggttgggatcattaaggtg
gaccccaagcagctcctggaggacggcatcaggaaggagctggtgaagagggtcgcctac
gcgctccacagaggactgatcttcaaccccaaggccaagtccagcgagctgatgcccaag
ctgcaggacatggcggccaccatggacggcttctacaggtcgtttgagtacatccaggac
tacgtcagcatctacggcctgaagatctggcaggaggaggtgtcccgcatcatcaactac
aacgtggagcaggaatgcaacagcttcctccgggccaagatccaggactggcagagcgtg
caccagtccacgcacatccccatccctaagtttccctccgtggacgagtcggccaccttc
atcggccgcctctgcagagagatcctccgcatcacggaccccaagctgacgtgctacgtg
gagcagctgaacacgtggtacgactcgaggagccaccgccaggtcaccgacaagcggctg
ttctctgaggtccagaacacgctggggaccttcggcctcaatgggctggaccgcctgctc
tgcttcaccatcgtcaaggagctgcagaacttcctggtgtggatccagaggacggtcctg
aaggacaaggccgtggtggatgttctgaaggtcctgctggccgtggtcacgccggtccag
ggcgttgtggggaacgccagcaaagtgtacgccagcgccgcggccaaaacccagaagatc
tggagcgcatacctggaggtcatcatgaaggtcggccagatgcagatcctccggcagcag
atcgccaacgagctcaactactcctgcaagtttgactccaagcacctggccgccgccctg
gagaacctcaacaagtctctgctggccgacattgaagcccactaccaggacccgtcgctg
ccctaccccaaagaggacaacactctgctgtacgacatcaccgcccacctggaggcggcc
ggcatccacaacccgctcaacaagatctacatcaccaccaagcgcctcccgtacttcccc
ctcatcaacttcctcttcattatcgctcagctgccgaggcttcagtacaacaaaaaccaa
ggaatgacctgcaagaaggcctcagatcctctggactggcctccgctggtgctgggcatg
ctcaccctgctcaagcagttccactccagatacacgcagcagttcttggctctcattggt
cagttcatccgctccatgatggagcagtgcaccagtcagaagatccctgacatgccctct
gacgtggtgggagcgctgatgctcctggaagactatgtgaagtacacaaaactgtctcgc
aaggtggccgaagcccacgttcccagtttcatctttgatgagttcagaacaatactgtga
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