Pseudoliparis swirei (Mariana hadal snailfish): 130212906
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Entry
130212906 CDS
T09868
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130212906
03036 Chromosome and associated proteins [BR:
pswi03036
]
130212906
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
130212906
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130212906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130212906
NCBI-ProteinID:
XP_056300171
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All DBs
Position
22:4805005..4858998
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AA seq
880 aa
AA seq
DB search
MMDHLSEACLGKENSDLVNNMADAKAPPAKLPRLEQNGSPLGRARLGSTGAKLAGVPYKP
TGHLLKTCHKRGNMLPVFCVVEHYENPMDFDSREEHAEFVLVRKDMLFNQLIEMALLSLG
YSHSSAAQAKGMIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLEDL
PPEQWSHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRW
YKHFKKTKDMMGMRQPSQLEGYLGTCVLRESPRANALEMDGLSDLSPPGSNHNHNHTHLG
FSQQQQPIPGSTAEQTPSSPVPPLPHAPPPPPPHGGQNGGRQPQLPPGMHHPGLVSTPIS
PQLVNQQMVMAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRNAHSKPMEPQASSNTEVSL
EIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKMASQSLLVNLRAMQNFL
QLQEAERDRIYQDERERSLTAASAMGLPPLISTPPIRPVQQPRREDCNSVRPEDWNPRIP
VGLSPVKPPALPSEWNGKTESCILNINSTIYDEIQQEMKRAKVSQALFAKVAASKSQGWL
CELLRWKEDPSPENRTLWENLSMIRRFLSLCQVERDAIYEQESSAGQQQQHGERPAAAAA
HLMHMSAEQPQAQSLQQHHQHHQPSLALQHPSQPFLSQQPLQHLQACAGPRLPPRQPSTA
SPAETEDEGVRDEGVRGGGGIKSRPCGGKISLEALGILQSFIQDVGLYPDEEAIHTLSAQ
LDLPKLTIIKFFQNQRFYINHPAKAPKEPGSNNNNNNNNSGSGSSSPAFEEELTDFREGG
ELLAELDDTQTHGTIFSIKIEEQLARGAEARAESAHEAAE
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatctcagcgaggcgtgtctgggcaaggagaactcggacctggtcaacaac
atggccgacgccaaggccccgccggccaagctgccccggctggagcagaacggcagcccc
ctgggccgggcccggctgggcagcaccggggccaaactagccggggtcccgtacaagccc
accggccacctgctgaagacctgccacaagagaggcaacatgctgcccgtgttctgcgtg
gtcgagcactacgagaacccgatggacttcgacagccgggaggagcacgccgagttcgtc
ctggtgcgcaaggacatgctcttcaaccagctcatcgagatggcgctgctgtcgctgggc
tactcccacagctcggcggcgcaggccaaaggtatgattcaggtgggcaagtggaacccc
gtcccgctgtcatacgtgacagacgcaccggacgctacggtggccgacatgctgcaggac
gtctaccacgtggtcacgcttaagatccagctgcacagttgtcctaagctggaggacctg
ccgcccgagcaatggagccactctacagtaagaaacgccctcaaggagttactcaaagac
atgaatcagagctctctggctaaagaatgtcccttatcacagagtatgatttcctccatt
gtgaacagcacttactatgcaaatgtgtcggcggcgaagtgtcaggaatttgggcgctgg
tataaacatttcaagaagacaaaagatatgatgggcatgcggcaaccatcccagctggag
ggctacctggggacgtgtgtcctccgagagagcccgcgtgccaatgcactagagatggac
ggcctgtccgacctgtctcctcccggctctaaccacaaccacaaccacacccacctgggc
ttctcccagcagcagcagcccatccccggcagcacggcggagcagacgccctcctcgccg
gtgcccccgctgccccacgccccgccgccgccgccgccccacggcggccagaacggcggc
cggcagccccagctgccccccggcatgcaccacccgggcctggtgtccacgcccatcagc
ccgcagctggtcaaccagcagatggtgatggcgcagatcctcaaccagcagtacgccgtg
aaccggctgctggcgcagcagtcgctgtcgcagcagtacctcaaccacccgccggtcaac
cgcaacgcccacagcaagcccatggagccgcaggcgtcctccaacaccgaggtgtccctg
gagatctaccagtgggtgcgggacgagctgaagcgggccggcatctcgcaggccgtgttc
gcccgcgtggccttcaacagaacccagggcctgctctccgagatcctacgcaaggaggag
gaccccaagatggcgtcccagtcgctgctggtcaacctgcgcgccatgcagaacttcctg
cagctgcaggaggccgagcgcgaccgcatctaccaggacgagcgcgagcgcagcctcacg
gcggcctcggccatgggcctcccgccgctcatcagcacgccgcccatccgacctgtgcag
cagccccggagggaagactgtaacagcgtgaggcccgaggactggaatcccaggatcccc
gtgggcctttcccctgtgaagccgccggcgctgcccagcgagtggaacggcaagacggag
agctgcatcctgaacatcaactccaccatctacgacgagatccagcaggagatgaagagg
gccaaggtgtcccaggcgctgttcgccaaggtggccgcctccaagagccagggctggctc
tgtgagctgctgcggtggaaggaggacccgtccccggagaaccgcacgctgtgggagaac
ctgtccatgatccgccgcttcctgagcctctgccaggtggagcgcgacgccatctacgag
caggagagcagcgccgggcagcagcagcagcacggcgagcggcccgccgccgccgccgcg
cacctgatgcacatgtccgccgagcagccgcaggctcagtcgctgcagcagcaccatcag
caccaccagccctctctggccctgcagcatccctcgcagcccttcttgtcccagcagccc
ttgcagcatctgcaggcctgcgccggcccccgcctgccgccccgccagccctccaccgcg
tccccggcggagacggaggacgagggcgtccgcgacgagggcgtccgcggcggcgggggc
atcaagtcccgcccctgcggcgggaagatctccctggaggctctgggcatcctgcagagc
ttcatccaggacgtgggcctgtaccccgacgaggaggccatccacaccctgtcggcgcag
ctggacctgcccaagctcaccatcatcaagttcttccagaaccagcgcttctacatcaac
cacccggccaaggcgcccaaggagcccggcagcaacaacaacaacaacaacaacaacagc
ggcagcggcagcagcagcccggccttcgaggaggagctgacggacttcagggagggcggc
gagctgctggcggagctggacgacacgcagacccacggcaccatcttctccatcaagatc
gaggagcagctggcgcgcggcgccgaggcgcgggcggagtcggcgcacgaggctgcggag
tag
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