Pseudoliparis swirei (Mariana hadal snailfish): 130212913
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Entry
130212913 CDS
T09868
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130212913 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130212913 (nr1d2a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130212913 (nr1d2a)
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1D. Rev-Erb
130212913 (nr1d2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2868
TFIIA
Motif
Other DBs
NCBI-GeneID:
130212913
NCBI-ProteinID:
XP_056300188
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Position
22:complement(4550463..4555574)
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AA seq
584 aa
AA seq
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MPEDMGTTKPGGVIAYISSGSASSPESFVFGASPGSRGFLAATQPASRPALPSRAVGMVV
DISPPARRGHGAAAEKAGRSSASAKSGITKINGMVLLCKVCGDVASGFHYGVHACEGCKG
FFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQ
RMLLEMQNAMNNMMSNSSQLHGHQSPVEAVTGAAGSSSSPSSSSSSSSSSSTASDSPSCS
NPSSPHFPQDSESVVSMDTNSSSASSCASDSGEDEAVTASRRQQQQQQQQQQQQQQQQQQ
QYAFACSQQRSPSSGTVALETEEQRSSWSCWDHNVVVGGHRQVVANAAYREERGVDQQQL
NSTPSCQPSEDGQRQHGCGTTSRAHLVCPMNTSPFVDPRKPSQEVWEEFSLSFTPAVRDV
VDFAKRIPGFRDLPEHDQVGLLKAGTFEVLMVRFASLFNVAERTVTFLSGKRYGLDALRS
LGAGELLNSMCEFSEKLAALRLDADEMSLFTAVVLVSADRSGIQDLYSVEALQDKLIRGL
RNLVMQNHGEESATTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggacatggggaccaccaagcctggaggagtcatcgcctatatttcctccggc
tccgcgtccagcccggagtccttcgtgttcggcgccagccccggcagcagaggcttcctc
gccgcgacgcagccggcgtcccgcccggcgctgcccagccgggccgtgggcatggtggtg
gacatctccccgccggccaggcgcggccacggcgccgccgccgagaaggccggacgctcc
tccgcgtcggccaagagcggcatcaccaaaatcaacggcatggtgctgctgtgcaaggtg
tgtggagacgtggcgtccggcttccactacggcgtccacgcctgcgagggctgcaagggc
ttcttcaggaggagcatccagcagaacatccagtacaagaagtgtctcaagatggagaac
tgcaccatcatgaggatcaaccgcaaccgctgccagcagtgtcgcttcaagaagtgtctg
gccgtcggcatgtcccgagacgccgttcggttcggccgcatcccgaagagggagaagcag
cggatgctgctggagatgcagaacgccatgaacaacatgatgagcaacagcagccagctg
cacggccaccagagccccgttgaggccgtgaccggcgccgccggctcctcatcttcgcct
tcatcctcctcctcatcctcctcctcctcctccaccgcttccgactccccgtcgtgctcc
aacccgtcctccccgcacttcccccaggactccgagtccgtggtttccatggacaccaac
tccagctcggcctcctcctgcgcgtcggacagcggcgaggacgaggctgtgacggcgagc
aggcggcaacaacaacaacagcaacaacaacaacaacaacaacagcaacaacagcagcag
cagtacgccttcgcgtgcagccagcagcggtcgccctcgtcggggaccgtcgccctggag
acggaggagcagaggagcagctggagctgctgggaccacaacgtggtcgtcgggggtcac
cggcaagtcgtcgccaacgccgcctacagggaggagaggggagtcgaccagcagcagctc
aacagcacccctagctgtcagccgtcagaagacggccagaggcaacacggctgcggcaca
accagcagagcacacttggtctgccccatgaacacgtcgcccttcgtggacccgcgcaag
cccagccaggaggtgtgggaggagttctccttgagcttcacgcccgccgtgcgcgacgtg
gtcgacttcgccaagaggatcccgggcttccgcgacctccccgagcacgaccaggtcggc
ctgctgaaggccggcaccttcgaggtgctcatggtgcgcttcgcctccctgttcaacgtg
gcggagcgcacggtgaccttcctgagcggcaagcgctacggcctggacgcgctgcggtcg
ctgggcgccggagagctgctcaactccatgtgcgagttcagcgagaagctggcggcgctg
cggctcgacgccgacgaaatgagcctcttcacggccgtggtgctcgtctcagccgatcgc
tccgggatccaggacctgtactccgtcgaggccctgcaggacaaactgatccggggtctg
aggaacctggtgatgcagaaccacggcgaggagtcggccaccaccttcaccaagctgctg
ctcaagctgcccgagctgcgttccctcaacaacatgcactcggaggagctgctctccttc
aaagtgcacccgtga
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