KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130212924
Entry
130212924         CDS       T09868                                 
Name
(RefSeq) ras-related protein Rab-5A-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137  Mitophagy - animal
pswi04144  Endocytosis
pswi04145  Phagosome
pswi04148  Efferocytosis
pswi05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130212924
   04145 Phagosome
    130212924
   04137 Mitophagy - animal
    130212924
   04148 Efferocytosis
    130212924
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130212924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pswi04131]
    130212924
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130212924
   04031 GTP-binding proteins [BR:pswi04031]
    130212924
Membrane trafficking [BR:pswi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    130212924
 Endosome - Lysosome transport
    130212924
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130212924
  Exosomal proteins of other body fluids (saliva and urine)
   130212924
  Exosomal proteins of colorectal cancer cells
   130212924
  Exosomal proteins of bladder cancer cells
   130212924
GTP-binding proteins [BR:pswi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    130212924
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 130212924
NCBI-ProteinID: XP_056300205
LinkDB
Position
22:complement(4740559..4748820)
AA seq 247 aa
MASRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNEESFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKNEPQASAASSGRNRGVDLTETAQPTGRSCCNGAADGASVSWCAILAPSAKKSSLFV
CENILWQ
NT seq 744 nt   +upstreamnt  +downstreamnt
atggcaagtagaggcggagctacacgacccaatgggccaaacgcaggcaacaagatctgc
cagttcaaacttgtgcttttaggagagtcggctgtggggaagtcgagtcttgtacttcgt
ttcgtcaagggccagtttcacgaattccaagagagcacaatcggagcggccttcctgact
cagacggtatgtttggacgacacgacggtcaagtttgaaatctgggacacggccggtcag
gagcgctaccacagtctggcgcccatgtactacagaggcgcccaggcggccatcgtggtg
tacgacgtcacaaatgaggagtcatttgtgcgggcgaagaactgggttaaagagcttcag
agacaagccagccccaacattgtaatagctctggccgggaacaaggctgacctcgccaac
aagagggcgctggacttccaggacgcacagtcgtacgcagacgacaacagcttgctcttc
atggagacgtcagccaagacctccatgaacgtcaacgagatattcatggccatcgcaaag
aagcttcccaagaacgagcctcaggcgtccgcggccagcagcgggcggaaccggggggtg
gacctgacggagacggctcagcccaccggccgctcctgctgcaatggcgccgcggacggc
gcctcggtgtcttggtgcgcgattcttgcaccttccgccaaaaaaagttccttgtttgtt
tgtgaaaacattctttggcaataa

DBGET integrated database retrieval system