Pseudoliparis swirei (Mariana hadal snailfish): 130212932
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Entry
130212932 CDS
T09868
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130212932 (irx1a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130212932 (irx1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130212932
NCBI-ProteinID:
XP_056300222
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Position
22:17511445..17516469
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AA seq
495 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVSSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPASFAAHASQAFYQYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEGEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDRSTEG
SRDHRGSVGAGGELDSLEKRRAFALQAHEAFDKSKSTISVHPGSKENSDGNNNNNTTRVL
SPDRVGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPGATTLPSAPHHQIQTHPAF
LPSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHYHHLQAQQQQQQPTSVVV
SPLAAAAALSNNSKAPPETHSPKHIEHENGVRSDSPPTQILKSSFRPIHDRSSLPSSARS
PQDATQRVLTALSSA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctcggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccttcgtcccggggagggagcacagaaatcggggga
agcccgtccgccaccgcagcagcggtgtcatcggtgttgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccttacaccagcgcggacttggctcttttctcacaa
atggggtcccagtacgaactgaaggacagtcccggcgtccatcctgccagctttgccgcc
cacgcgtctcaggccttctaccagtacggccagttccagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccttgaaagcctggctcaacgagcacaggaag
aacccgtacccgaccaagggggagaagatcatgctcgccataatcaccaagatgacgctg
acgcaggtctccacatggttcgctaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggaagcaggagcaaagaggacggggaggacggcaacttgttcggcagcggcgac
gagggggagaagaacgaagacgaggaggagattgatttggagagcatagacatagacaag
atcgacgacaacgacggggatcagagcaacgaggacgacgacgacagatccacggagggc
agcagggaccacaggggcagcgtgggcgctgggggggagttggacagcttggagaagaga
cgggccttcgccctgcaggcccacgaggcctttgacaaatcgaagagcacaatttcggtt
cacccggggagtaaggagaactcggacggcaacaacaacaacaacaccacgcgggtgctg
tccccggatcgggtcgggagctttcctctcccgtctaacaataagcccaaaatatggtct
ttagcagagaccgcgacgagccccgatagttcttcccagaaacccacgtccccctgtggg
cccggggccaccacgctcccatcagcaccccaccaccagatccagacccacccggccttc
ctccccagtcatggactgtacacttgccagattggaaagttccacaactggacaaatggg
gctttcctgggtcagaactccctcctcaacgtgaggtcgtttctgggagtaaaccagcac
catcactaccaccacctgcaggcccagcagcagcagcagcagccgacatcagtggtggtg
tcgccattagcggccgcggcagcactcagcaataacagcaaggccccaccagagacccac
agtcccaagcacatagaacatgaaaacggtgtacggtccgattcacctccaacacagatt
ctgaagtcttcctttcgacccatccatgacagatcctctctgccttccagcgccaggagt
ccgcaagacgccacgcaacgagtcctcacggctctctcctcggcttga
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