Pseudoliparis swirei (Mariana hadal snailfish): 130212934
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Entry
130212934 CDS
T09868
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00900
Terpenoid backbone biosynthesis
pswi01100
Metabolic pathways
Module
pswi_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130212934 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pswi01006
]
130212934 (fdps)
Enzymes [BR:
pswi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130212934 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130212934 (fdps)
Prenyltransferases [BR:
pswi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130212934 (fdps)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
130212934
NCBI-ProteinID:
XP_056300225
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All DBs
Position
22:13355714..13360436
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AA seq
398 aa
AA seq
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MRRLLSSVIKAHKTMRTMWLAVSPRHVKSASVVTGASSLQGDAVCNGAHGDTTTLLTDPQ
LFEDKFDELVTELSEKDLVDPALTDALTRFREILVYNSPGGKRNRGLSVIASLRDLLPPT
QLTQDTVQQALLVGWCIELLQAFFLVADDIMDGSVTRRGQPCWYKKDGIGMDAINDSFLL
EASIYRLLRRHCRDQPYYVHLLELFTETSFQTMLGQALDLMTSTPGQVDLNRFTMERYNA
IVKYKTAFYSFYLPVAAAMYIAGIKSEEEHNNAKHILLEMGEFFQIQDDYLDCYGDPAVT
GKIGTDIQDNKCSWLVVTALETMTPEQRAELKECYGRHDEACIEKVKALYCTLQMPMLYH
KYEEDSYQRLQKLIACHAQNLPHSIFLNFAKKIYKRNK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtctgctcagctcggtcattaaagcccacaaaacaatgcggaccatgtggctc
gccgtctccccgcgtcacgtcaagagcgcgtctgttgtgacgggcgcctcgtctctccag
ggggacgcggtctgcaacggggcgcacggcgacacgacgacgctgctgaccgaccctcag
ctgtttgaagacaagttcgacgagctggtgacggagctttcagagaaggacctcgttgac
cccgcgctgactgatgctctgaccaggtttcgagagattttggtgtacaattcccctgga
ggcaagaggaaccgaggactgtctgtgatcgcttcgttgagggatctcctcccgcccact
cagctcacacaggacaccgtgcagcaggctctgctggttggctggtgcattgagttgctt
caggcattttttctggtggcagatgatatcatggatggatctgtgactcggagaggacaa
ccctgctggtacaagaaggatggaatcggtatggatgccatcaatgattcatttctctta
gaggcatcaatctacagactgcttcgcagacattgcagggatcagccgtactacgttcac
ctactggagctatttactgagacatctttccagaccatgctgggccaagctctggacctc
atgacttccacccctggtcaggttgacctcaatagattcacgatggagaggtataacgct
attgtaaagtacaagactgcattttactctttttacctcccagtggcagctgcgatgtat
attgcaggaatcaagagtgaagaggaacacaataatgccaaacacatcctacttgagatg
ggagagttttttcaaatacaggatgactacttggactgctacggagaccctgctgtgaca
ggaaagattggcacagacatccaggataacaaatgcagctggctggtggtgacggcgctg
gaaaccatgactcctgaacaaagagcagagctaaaggaatgctacgggcgccacgacgaa
gcctgtatagaaaaggtcaaggcattgtactgcaccctgcaaatgccaatgttgtaccac
aaatatgaggaagacagctaccagcggttacagaaactcattgcctgtcatgctcagaac
cttcctcactcaatcttcctcaacttcgccaagaaaatctacaagaggaacaagtga
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