Pseudoliparis swirei (Mariana hadal snailfish): 130212943
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Entry
130212943 CDS
T09868
Name
(RefSeq) RING finger protein 145-like
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130212943
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130212943
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130212943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-RING_5
Prok-RING_4
zf-P11
RINGv
Motif
Other DBs
NCBI-GeneID:
130212943
NCBI-ProteinID:
XP_056300249
LinkDB
All DBs
Position
3:complement(7858483..7871175)
Genome browser
AA seq
777 aa
AA seq
DB search
MAVKDRVEAVLNVGLRVPSIVLLDVLYRWDVSSFFQKIQRSSLSNNPLFQYKYLALYLHY
VGYILSLVLLTLPRQHLVKLYLYVLTALLLFAGHQVSRDYVRSELDSGYEGPVYLEPLSI
NRFTTALIGQLVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFINKFSMIFTG
LEVIYFLASNLLVPYNLAKTAYKELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLLLFA
LQIYSYFSTRDQPTSRERLLFLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQ
GYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLIFPAYMAYMICKFFHMDFWLLIIISSSILT
SLQVLGTLLIYILFMVEEIQKAPVENMDEVIYCVNGTYRFLEFLVAVCVVCYGVSETVFG
EWSVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVNKIKCLPTASGTQLEQYNDICAIC
YQDMNNAVITPCSHFFHAGCLKKWLYVQETCPLCHSQLKSQSPTTIPEAPAANQSPAGQE
AAEAEAEAVDQKPKDDPLPEEGAAEQEGVNGPAMSAGEISSSSGVPSTPQHLAKTPTSSS
SSSSAFPRVIDSRKQSLTDYPSLSSTSSSATMDMLLHLPPSSSSSSSSSSSQPLAQAEIT
PAEPESAPQLNRGFLLDSKESPPGQSSHLDQPTSPSSSEQQPPPPPPLPPPPPPCSL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaaggaccgcgtcgaggcggtgctcaatgtgggcctgcgtgttcccagcatc
gtgctgctggatgtcctgtaccgctgggacgtcagctccttcttccagaagatccagcgg
tccagcctgtccaacaaccccctgttccagtacaaatacctggcactgtacctgcactac
gtaggttacatcctgagcctggtcctcctgacgctgcctcgtcagcacctggttaaactc
tacctgtatgtcctcacagccctgctgctgttcgctggccaccaagtctcaagggattat
gtccgcagtgaactggactctggctatgaaggacctgtctacctggaacctctctccatc
aacagattcaccactgcactcattggtcagctggtggtgtgtacgctttgttcctgtgtg
atgcagaccaagaggatttggcttttctcggctcacctgctccctctggtggcccgactg
tgtctggtcccactggagaccattgttttcatcaataagttctccatgatcttcacgggc
ctggaggtcatttacttcctcgcctctaacttgttggtaccgtacaacctggccaagact
gcctacaaggagctggcccaggtggtggaagtgtacgggctgcttgctttgggtatgtct
ctctggaaccagctggtccttccggtcctcttcatgtgtttctggctcctgctgttcgct
ttgcagatctactcctacttcagcaccagagaccagccgacctcaagggagaggctcctt
ttcctcttcctcaccagtattgcagaatgctgtagtacgccatactctcttctgggtctc
gttttcaccgtctccttcgtcgctctgggagttctcacactctgcaagttctacctgcag
ggctacagagcctttatgaatgacaacaccatgcacagggggatgacagaaggcatcacc
ctgctgatcctcgccgtccagactggcctcatcgagctccaagtcattcaccgagccttc
ctcctctccatcatcctcttcattgtggttgcttctatcctgcagtcgatgttggagata
gccgaccccatagtcctggccttgggagcatcaagagacaagagtttgtggaaacacttc
cgcgcggtgtctctgtgtctgttcctgctgatctttccagcctacatggcctatatgatc
tgtaagttcttccacatggacttctggctcctcatcatcatctcctcctcaatcctcaca
tcactgcaggttctcggcactctgctgatctacattctcttcatggtggaggagattcaa
aaggctccagtggagaacatggatgaagttatctactgtgtcaacgggacgtacagattt
ctggagttcctggttgcggtgtgtgtggtatgctacggcgtgtcagagacggtgttcggg
gagtggagtgtgatgggcagcaccatcatcctggtccactcgtattataacgtctggctc
agagcgcagctgggctggcagagcttccttctccggagagatgctgtgaacaagatcaaa
tgcctccccacggccagcggcacgcagctggagcagtacaacgacatctgtgcgatctgc
taccaggacatgaacaatgctgtgatcacgccatgtagtcatttcttccacgctggctgt
ctgaagaaatggctttatgtccaggagacgtgccccctctgtcactcgcagctaaagagc
caatcaccaaccaccatcccagaagcccctgcagccaatcagagccctgcagggcaagaa
gcagcagaagcagaagcagaagcagtggatcagaagccaaaagatgacccacttccagag
gagggagcagcagagcaggagggagttaatggacctgccatgtcagctggagaaatctcc
tcctcctctggtgtgccctctactccccagcacctagccaagactccaacctcatcatca
tcttcctcttcggcttttccacgtgtaattgactctcggaagcagtcgctcacagattac
ccttctttgtcttccacctcttcctctgccacaatggacatgctcctccatcttcctccc
tcctcctcctcatcttcctcctcctcctcctcacagccactggcacaggcagagataacc
cctgctgaacctgagtccgcccctcaactaaaccgaggcttcttactcgacagcaaggag
tcgcctcctggtcagtcatcacaccttgaccagcccacctccccgtcttcctctgagcaa
cagcctcctcctcctcctcctcttcctcctcctcctcctccatgcagcctctga
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