Pseudoliparis swirei (Mariana hadal snailfish): 130212945
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Entry
130212945 CDS
T09868
Name
(RefSeq) Wilms tumor protein 1-interacting protein
KO
K16682
LIM domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130212945
03036 Chromosome and associated proteins [BR:
pswi03036
]
130212945
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130212945
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
130212945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
130212945
NCBI-ProteinID:
XP_056300248
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Position
22:complement(9218535..9329152)
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AA seq
617 aa
AA seq
DB search
MDKYEDFGLEASKFIEDLNMYEASRDGLFRMRRDAGNNPDFEETRRVFATKMSKIHMQKQ
QEEMAKNNQAIKMNGGAHNNSYYTKDRPPINSYRQPCEAAAKPPMLSGPVPGTAPGGPYA
QFDGQKHHAGIQSELPVGRACGYGNNYDNKERSEAHSYLHNTPSPPSPGHASLSAPTHAR
YPVSQPAAWAPSRESQLSPPLPGCGGSSVSKQQQQPQYQSASSTTNSLPPQHIQAIPPPL
NLSPASSAGPAWGWSGEPPGSEKPELTPALPLSAFTAGADFQMQLPSTHSATHYATSSPT
SRPSATHNGPLAASSLSPEPFETPLSKAQVASAALIPGNVSKSSSQGQGQSLIPVCGHVF
GAEAKILGPSKLVQIPCQSEQGPSAAEMKLEALTHRLEKEMDAQPKTDYFGVCVKCNKAV
HGAGQACQAMGSLYHDGCFTCSACSRRLRGKAFYYVGGRVFCEEDFLYSGFQQSADKCNA
CGHLIMDMILQALGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCVV
CNQPILPSEGSDETIRVVSMDKDYHVECYHCEGCKMELNDEEGHRCYPLNGHLLCHSCHL
KRTEPGCPSPVAPAAAY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggattttgggctcgaggcgagtaagttcatcgaggacctcaacatg
tacgaagcctccagagacggcttgtttcggatgaggagggacgcaggaaacaaccccgac
ttcgaggagacgaggagggtgtttgccactaagatgagtaagatacacatgcagaagcag
caagaggagatggcgaagaacaaccaggccatcaaaatgaatggcggggcccacaacaac
agttactacaccaaagacagaccgcccatcaatagttacaggcaaccgtgcgaagcggcc
gcgaagcccccgatgctctccggcccggtgccgggcaccgcgcctgggggtccgtacgcg
cagtttgacggccagaaacaccacgcgggcatccagtctgaacttccagtaggccgggcg
tgtggctacggaaacaattacgataataaggagcgctcagaggctcattcatacctgcat
aacaccccttctccccccagcccaggacacgcgtctctcagcgcgcccacacatgcgcgt
tacccggtcagccagccggccgcctgggccccatccagggagagccagctttccccaccg
ttgcccgggtgtgggggcagcagtgtgtctaagcagcagcagcagccccagtaccagtct
gcatcttccaccaccaacagccttccaccccagcacattcaggccatccccccgccttta
aacctgagccctgcctcatctgccgggcccgcctggggatggtctggagagccaccgggc
tcagaaaaacccgaactcacaccggccctgcctctgagtgccttcacggcaggagctgac
ttccaaatgcagctaccctccacacattcggcaacccattacgcaacatcttctccaact
tcgagaccctccgccacccataatggtcctctggcagcatcctcgctctcacctgaacct
tttgaaacacctctatccaaagcccaggtggcatctgctgccttgattccaggcaatgtg
tccaaaagcagcagccagggtcaaggacagagcctaataccggtctgtggacatgtattc
ggcgctgaagctaaaatcctgggcccctccaagcttgtccaaataccctgtcagtctgaa
caggggccttcagcagctgaaatgaagttagaagccctcacccatcgactggaaaaagag
atggatgcccaaccaaagactgactactttggcgtctgtgtgaagtgcaacaaggcggtg
catggagccggccaggcctgccaagctatgggaagcctctaccacgacggctgcttcacc
tgcagcgcctgcagtcgaaggctgagggggaaggcgttctactacgtcggagggagggtt
ttctgcgaagaggactttctgtactccggtttccagcagtctgcagacaagtgcaacgca
tgtggacatctgatcatggacatgatcctgcaggccctcgggaagtcttaccaccctggc
tgtttccgctgtgtcatctgtaatgagagccttgacggagtgcccttcactgtggacacc
gaaaataagatctactgtctcaaagactaccacagggtcctggcgcctaaatgtgtggtg
tgtaaccagcccatcctgccctcagaggggtctgatgaaaccattcgagttgtatccatg
gacaaagactaccatgtggaatgctatcactgtgagggctgtaagatggagctgaacgac
gaggagggtcaccgctgctaccctctgaacggccacctcctctgccactcctgccacctg
aagcgcacggagcccggctgcccctctcccgtcgcgccggccgccgcctactga
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