Pseudoliparis swirei (Mariana hadal snailfish): 130212950
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Entry
130212950 CDS
T09868
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130212950
03036 Chromosome and associated proteins [BR:
pswi03036
]
130212950
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130212950
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130212950
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130212950
microRNA pathway
RISC loading complex
130212950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
DUF4595
Motif
Other DBs
NCBI-GeneID:
130212950
NCBI-ProteinID:
XP_056300256
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Position
22:complement(6539655..6563772)
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AA seq
867 aa
AA seq
DB search
MEIGTTGDVGAQSLFSLPRRPGYGTMGKPIKLLANCFQVDIPKMDVYLYEVDIQPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVAPAGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRCMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVPGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFKFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPII
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACINLEKDYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagacgttggggcccagtccctgttctccctgcctcggcgg
cctggctatggcaccatggggaagcccatcaagctgctggccaactgcttccaggtggat
atccccaagatggacgtctacctctacgaggtggacatccagcctgacaagtgtccccgg
cgagtcaacagggaggtggtcgactcaatggtacagcactttaaggtgaccatctttggg
gatcgcaggccagtctatgatggaaagaggagcctgtacacagccaatccactacctgtg
gcgcccgcaggggtggacctggatgtcactctgccgggcgagggagggaaagatcgcccc
ttcaaggtctccataaagtttgtgtctctggtcagctggcacatgctccacgaggtgctg
actggccgctgcatgcctgagcccctggagctggacaagcccatcagcaccaacccggtg
cacgcagtggatgtggtgctgcgacacctgccctccatgaagtacaccccggtgggtcga
tccttcttctcggctccagagggctacgaccatcccctgggaggcgggagggaggtttgg
ttcggcttccatcaatctgtgcgcccggccatgtggaagatgatgctgaacattgatgtg
tccgccaccgccttctacaaggctcagccagtcatccagttcatgtgcgaagtgctggac
attcacaacatcgacgagcagccacgccccctcacagactcgcaccgggtcaaattcacc
aaagaaatcaaaggtctgaaggtggaggtgacgcactgtggaaccatgcgcaggaagtac
cgcgtctgcaacgtgacccggcggcccgccagccaccaaacgttccctctccagttggaa
aacggtcagactgtcgagcgcacggtggcccagtacttcagggagaagtacaacctgcag
ctcaagtacccacatttaccctgtctgcaggttggccaggagcagaagcacacctacctg
cccctggaggtgtgcaacattgtacctggtcaacgttgcatcaagaagctgacagacaat
cagacgtccaccatgatcaaagccacagctcgctcagctcccgacagacaagaggagatc
agcaggctggtgcgcagtgccaactacgaggccgaccccttcgtgcaggaattcaagttc
aaggtgcgcgacgagatggcccacgtgaccgggcgagtgctacccgcccccatgctgcag
tacggcggcagggtgagcacagagcactttatgaaccgcacggtggccacgcccagccac
ggcgtgtgggacatgagggggaagcagttccacaccggggtggagatcaagatgtgggcc
atcgcctgcttcgccacacagaggcagtgtcgcgaggaaatactaaagggtttcacagac
cagctgcggaagatctccaaggatgctgggatgccgattcagggccagccgtgtttctgt
aaatacgctcagggagcggacagcgtggagcccatgttcagacacctgaagaacacctac
tccggactgcagctcatcatcgtcatcctgccggggaagactcccgtctatgcggaggtg
aagcgtgtgggagacaccctgctgggcatggccacgcagtgcgtccaggtgaagaacgtg
gtgaagacgtcccctcagaccctctccaacctctgcctcaagatcaacgtgaagctgggc
ggcatcaacaacatcctggtgcctcaccaacgaccatcagtgtttcagcagccaatcatt
ttcttgggtgcggatgtcacacatccacctgccggagatgggaagaagccttcaattgct
gcagtggtcggcagtatggacgcccaccccagcaggtactgtgccaccgtgcgagtccag
aggcccaggcaggaggtcatccaggacctggcctccatggtgcgggaactgctcatccag
ttctacaagtcgacccgctacaagcccaccaggatcattttctacagggacggcgtttca
gaaggccagttcagacaggtgctgtattatgagctgctggccattcgtgaggcctgtatc
aacttggaaaaggattaccagccaggcatcacctacatagttgtgcaaaaacgccaccac
acacggctcttctgtgccgaccgcaacgagagagttggacgtagtggaaacattcctgcc
ggcaccaccgtggatacggacatcacgcatccctacgagtttgacttttacctctgcagt
cacgctggaatacagggcaccagccggccctcccactaccacgtgctgtgggacgacaat
tgtttcaccgccgacgagttccagctgctcacctaccagttgtgccacacctacgtgcgc
tgcacccgctcggtctccatccccgcgccagcctactacgcccacctggtggccttccgt
gcccgctaccatctggtggacaaggagcatgacagcgccgagggcagccacgtgtctggt
cagagtaacggtcgggacccccaggcgctggccaaagctgttcagatccaccacgacacc
ctgaggaccatgtacttcgcctga
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