Pseudoliparis swirei (Mariana hadal snailfish): 130212952
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Entry
130212952 CDS
T09868
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130212952 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130212952 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130212952 (gdf6a)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Transforming growth factors (RSTK binding)
130212952 (gdf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Jak1_Phl
PEX14-like_2nd
Motif
Other DBs
NCBI-GeneID:
130212952
NCBI-ProteinID:
XP_056300259
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All DBs
Position
22:20040458..20047757
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AA seq
459 aa
AA seq
DB search
MDASRLVTLYLGLLLTFLGNIPCFQSAAIISPSAPRRNRGARISHRDGQRSSKILKDILV
STHPVVGHHKEDLKDAIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGT
DDLLLSPLRRQKYLFDVSTLSDKEELVGAELRIFRRARGNVQPSSSLQTPGLYDIQLYPC
RSDRLLDSRSLDPLDSTKAGWEVLDAWDMFKANQHHYHHPHPHHPHQHFQQGNQLCFQLR
VTLRKSDTEVDLRQLGLDRSGRPQQEKAILVAYTRSKKRENLFNEMKEKIKSRRSADEKK
ETAAAAAAKAAAASVVAVAGEEGVSLRGVKGEGPRRRRRTPLSNRHGKRHGKKSKSRCSK
KALHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNSTP
PSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgactcgtgacgctatatctgggtctgctcctcactttccttgggaat
ataccgtgtttccagtctgctgctatcatctccccctctgcgccgaggaggaaccgggga
gcccggatctctcaccgggacggacaaaggtcatccaagatcctaaaagacatcctcgtg
tctacgcaccctgtcgtgggccatcacaaagaagacctaaaggacgctattgtgccccat
gaatacatgctctccatatacaggacatactcggctgcagagaagctcggactaaacgcg
agctttttccgctcctctaaatctgccaacaccataacaagttttgtggaccgaggaaca
gacgatctcttgctctctcctctgcgcagacagaagtatctgtttgatgtctcaaccctt
tcagacaaagaggagctggtcggggcggaattaaggatatttaggagagcgcgcgggaat
gtgcagccttcttcttccctgcagaccccgggcctctacgacatccagctctacccctgc
cgctcggaccggctgctggactccaggtctctggacccgctggactccaccaaggccggc
tgggaggttctggacgcgtgggacatgttcaaagcgaaccagcatcactaccaccatcct
caccctcatcatcctcatcaacacttccagcaggggaaccagctctgcttccagctgcgc
gtcacgctgcgcaaatcggacaccgaggtggacctgaggcagctggggctggaccggagc
ggccggccccagcaggagaaggccatcctggtggcctacacgcgctccaagaagagggag
aacctgtttaacgagatgaaggagaagatcaagtcgcggaggtcggcggacgagaagaag
gagacggcggcggcggcggcagcgaaggcggcggcggcgtccgtggtggcggtggcgggg
gaggagggggtgtcactgaggggggtcaaaggggaggggccccggcggcggcggaggacc
ccgctgagcaaccggcacggcaagaggcacgggaagaaatccaaatccaggtgcagcaag
aaggcgctgcacgtgaacttcaaggagctgggctgggacgactggatcatcgcgcccctg
gattacgaggcgtaccactgcgagggcgtgtgcgacttcccgctgaggtcgcacctggag
ccgaccaaccacgccatcatacagacgctcatgaactccatggaccccaacagcaccccg
cccagctgctgcgtgcccaccaagctgagccccatcagcatcctgtacatcgactcgggc
aacaacgtggtgtacaagcagtacgaggacatggtggtggagcagtgcggctgcaggtag
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