Pseudoliparis swirei (Mariana hadal snailfish): 130212996
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Entry
130212996 CDS
T09868
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130212996 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130212996 (abcb4)
04147 Exosome [BR:
pswi04147
]
130212996 (abcb4)
04090 CD molecules [BR:
pswi04090
]
130212996 (abcb4)
Enzymes [BR:
pswi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
130212996 (abcb4)
Transporters [BR:
pswi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
130212996 (abcb4)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130212996 (abcb4)
CD molecules [BR:
pswi04090
]
Proteins
130212996 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
ABC_ATPase
AAA_16
Rad17
RsgA_GTPase
AAA_5
AAA_30
G-alpha
AAA_29
DUF815
AAA_7
PRK
AAA_28
AAA_15
SbcC_Walker_B
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
130212996
NCBI-ProteinID:
XP_056300326
LinkDB
All DBs
Position
22:complement(12574257..12593844)
Genome browser
AA seq
1280 aa
AA seq
DB search
MDVKDEKDKLAFAKDEQKEYISESKDKKKEKEKKPAVSMVGPIDVFRFAKGLDIVLILAG
LFCAIVNGVTLPLMCIVFGDMTDILVKTAPPQQFNSTNVTFVPRNSTLEADMTQYAIYFS
ILGFVVLVVAYGQVAFWTLSAGRQTKRIRKLFFHCIMQQDIGWFDVTETGELNTRLTDDV
YKIQEGIGDKAGKLIQALSTFISAFIIGFSKGWKLTLVILAVSPVLILSAGMFSKLLANF
TSKEQAAYAKAGAVASEVISAIRTVFAFNGQEKEIKRYIKNLEDAKAVGIKKATYANFAF
GFNFLMIYLAYALAFWYGSTLILKHEYTIGTVITVFFVVLIGAFTLGQASPNIETFAGAR
GAAYKVYSIIDHKPNIDSFSEAGFKPDTIEGNIEFKNIHFSYPSRPEVQVLQNLSLSVTS
GQNIALVGSSGCGKSTTIQLLQRFYDPQEGSVTIDGHDIRSLNVRYLRDMIGVVSQEPIL
FATSIAENIRYGRPDVTQSDIAQAAKESNAYNFIMALPDKFETMVGDRGTQMSGGQKQRI
AIARALVRNPRILLLDEATSALDAESETMVQAALDKVRQGRTSIIIAHRLSTIRNVDVIA
GFQQGKVAELGTHSQLMTEQGIYHTLVTMQTFQKVEESEEGKGRGDSVDANSPLTKIRSQ
SVHSRKLRNTSFASSEGEKEEKQKLKEYGTEEKEDCPLLSFPQLMNLNRNEWPYILVGTI
CAIFNGAMQPLFAVIFSKIITVFAEHNQEVIREKSLFFSLMFIVIGVITFVALFLQGYCF
GKSGETLTLKLRRDAFKAMMRQDLSWFDNPQNSVGALTTRLATDAAQVQGATGIRLATLA
QNVANMGTSVIISFVYGWQLTLLVLAVVPFMAAAGTMEMRALTGYAAQDKKELEKSGKIA
TEAIENIRTVVSLNIQPKFESLYEEHLEVPYKNSQKNAHVHGLCFSITQAMIYFAYAGCF
RFGAYLIVRGMMNAEGVFLVISAILYGAMALGEANSFAPNYAKAKISASHLMMLLNKEPA
IDNLSQEGESPDKFEGNVHFDGVFFNYPARPDVPVLRGLNLKVSKGETLALVGSSGCGKS
TTIQLLERFYDPREGRVLLDNMNVKKLNIQWLRSQIGIVSQEPVLFDCTLSENIAYGDNS
RIASIAEIQEAAKAANIHTFIDSLPKKYDTQAGDKGTQLSGGQKQRIAIARAILRNPKVL
LLDEATSALDTESEKVVQEALDEASKGRTCIIVAHRLSTIQNADRIAVFSGGVVIELGTH
QQLLAQKGVYHMLVNKQMGH
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaaagacgaaaaggacaagttggctttcgccaaagacgaacagaaagaatat
ataagtgaaagcaaggacaagaaaaaggagaaagaaaaaaagccagcggtttccatggtt
ggccccattgatgtgtttaggtttgcaaaaggcttggacattgtcttgatcctggcaggg
cttttctgtgccatcgtcaacggagtaactcttcctctcatgtgcatcgtgtttggggac
atgacagacattcttgtaaagaccgcccctccgcaacaattcaacagcaccaacgtcacc
ttcgtaccaagaaacagcaccttagaggcagacatgacacaatatgccatttacttctcc
atactgggctttgtcgtgctggtggttgcctacgggcaggtggccttctggaccctgtcg
gccgggcggcagacaaaacgcatccgcaaactattcttccactgcatcatgcagcaggac
atcggctggttcgatgtcactgaaacaggagagctcaacacacgtctcacagatgatgtc
tataagatccaagagggtatcggtgacaaggctgggaagcttattcaggccttaagcacc
ttcatctcagccttcatcatcggcttcagcaaaggctggaaactcactctggtcatcctg
gccgtgagccctgtactcatcctttcggctggaatgttctcaaagttgctcgcgaatttc
acttccaaagagcaggctgcgtatgccaaagctggagctgtggcatcagaggtaatctct
gctatcaggacagtgtttgccttcaatggtcaggagaaagaaatcaagagatatattaag
aacttagaggatgcaaaggccgtgggaataaagaaggcgacatatgccaattttgccttt
ggcttcaacttcctgatgatctacctggcctatgctctggccttctggtacggaagtaca
ctcatcctcaagcacgaatacacgattggaacagtgatcactgtgttcttcgtggtgctt
atcggagcgttcactctgggtcaggcctctcctaacatcgagacctttgccggtgcccga
ggagctgcatataaagtctacagcattattgatcataaaccgaatattgacagcttttca
gaggccggcttcaagcctgataccatagaaggaaacatagagttcaagaacatccacttc
agctacccctcgaggccggaggtccaagttctgcagaacttgtctctgagcgtcaccagt
gggcagaacattgccttggtcggtagcagcggctgtggtaaaagcaccacgatccagctg
ctgcagaggttctacgatccccaagaaggatctgtgactattgacggtcacgacatccgt
tcccttaacgtccgctacctgagggatatgattggcgtggtgagccaggagcccatcctc
tttgccaccagcatcgctgagaacatcagatacggccggcccgacgtgacgcagtccgat
atcgcgcaagctgccaaggagtccaatgcttacaacttcattatggcccttcctgataag
tttgagacgatggtcggagaccgagggactcaaatgagcggaggacagaagcagaggatt
gcgattgctcgagctctagtccgcaaccccagaatcctcctgttggacgaagccacatct
gctcttgatgctgagagtgagaccatggtgcaagctgcactcgacaaggtccgacagggc
cgtacctccataatcattgcccaccgcctctcaaccatccggaacgtggacgtcatcgct
ggctttcagcaagggaaggttgcagagctggggactcacagtcaactaatgacagaacag
ggaatctaccatacgctggtcaccatgcagacctttcaaaaggttgaggagtcggaggag
gggaaaggacggggggattctgtggacgcgaacagcccgttgaccaagatccgttctcag
tctgtgcacagcaggaagttaagaaacacctcttttgcttcctcagagggagagaaagag
gagaaacagaagttgaaggaatacgggacagaagagaaggaggattgtcccctcctgtcg
ttccctcaattgatgaacctcaaccgcaacgagtggccgtacattttggtcgggaccatc
tgtgccatcttcaacggagctatgcaaccattgtttgctgtcatcttctccaagatcatc
actgtatttgctgaacacaatcaagaggtgatcagggaaaaatctcttttcttttctctg
atgttcattgttattggagttataacattcgtcgccttgtttctacagggctactgtttt
ggtaaatctggggagacgctgacccttaaactgagacgcgacgcctttaaggccatgatg
agacaggacctcagctggtttgacaacccccaaaacagtgttggagcgctcactacgaga
ctggccacagacgcagcccaagtgcaaggggccacaggaatccgtctggccacgctggcc
cagaacgtcgccaacatgggcacctctgtgatcatctccttcgtgtacggctggcagctg
actctgctcgtcctggctgtggtgcccttcatggcagcagctggaaccatggagatgcgg
gcgcttaccggatacgccgctcaggacaagaaggagctggagaagtccggaaagattgct
acagaggccattgaaaatatccgtactgttgtctctctaaacatacaacccaagtttgag
tctttgtatgaggaacaccttgaagtgccatacaagaactctcagaaaaacgcccatgtg
catgggttatgcttctccatcacccaggccatgatctactttgcttacgcaggctgtttc
cgctttggagcttatctcattgtgagaggaatgatgaatgctgagggagtattccttgtc
atttctgctatactgtacggtgccatggcgctcggagaggccaactccttcgctccaaac
tatgcgaaggccaaaatctcagcttcccacctcatgatgctgctgaacaaagagcccgcc
atcgacaatctctcacaggagggggagtctccagacaaatttgagggcaacgtgcacttt
gacggtgtcttttttaactacccggcacgccctgatgtgcccgtcctcagagggctgaat
ctcaaggtgagcaagggagagactttggccttggtggggagcagcggctgtggaaagagc
accaccatccagctgctggagaggttctacgatcccagagagggcagagtgctgctcgac
aatatgaatgtgaaaaagctgaacatccagtggttgagatctcaaataggcatcgtatcc
caggagcctgtgctgttcgactgcaccttgagtgaaaacatcgcctatggagacaacagc
cgcatcgcatccattgcggagattcaggaagctgctaaagcagccaacattcacaccttc
attgatagcctgccaaagaagtacgacactcaggcaggtgataaaggaactcagctgtcc
ggtggccagaagcagcgcatagccatcgcccgagccatactccgcaaccccaaagtgctg
ctcctggacgaggccacatctgcactcgacactgagagtgagaaggtggtgcaggaggcg
ctggacgaggccagtaagggcaggacgtgtatcattgtggctcaccgtctgtccaccatc
caaaatgcagaccgcatcgctgttttcagcggaggagtggtgatcgaactggggacacat
caacagctgctggcccaaaagggagtctaccacatgctggtcaacaaacagatgggccac
tag
DBGET
integrated database retrieval system
