Pseudoliparis swirei (Mariana hadal snailfish): 130213009
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Entry
130213009 CDS
T09868
Symbol
hoxa10b
Name
(RefSeq) homeobox protein Hox-A10b
KO
K17443
homrobox protein Hox-A10
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130213009 (hoxa10b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130213009 (hoxa10b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
LTI65_LTI78_NYQTKV
Motif
Other DBs
NCBI-GeneID:
130213009
NCBI-ProteinID:
XP_056300354
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Position
22:complement(10736027..10738555)
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AA seq
349 aa
AA seq
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MSARKGYLHPPSNYTTKMTCPNNQAGNSFFVDSLINVRTDSGAYYQSNGVYLPPASEYTY
GLSGGSCFPGIGKRNEPSTQSVIPSSAPYVQGMETWLETSRSCRVDQPGGQHLAQCSFSP
NIKEESAYCLYESDKCPKGATVDDVSYSTASCPVTGSTLPVPGYFRLSQTYASSRLYHDV
QPNVNHFTLQRPARLDSQPSQPQTAAAEPERRESHEEAPVPAPCAPAREADNRLSSETSS
SPEPAESCSVGCPEKPVKGDGKMQSTANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYL
TRERRLEISRGVNLTDRQVKIWFQNRRMKLKKMSRENRIRELSNNFSFS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagaaagggctatcttcatcctccgtcaaattataccacaaagatgacatgc
cccaacaaccaagctggaaactcgtttttcgtggactctctaatcaacgtgagaaccgac
agcggtgcgtattaccaaagtaacggggtgtacttgccaccggcgtcggaatatacctat
ggactctccggtggctcttgtttcccggggatcggtaagcgcaacgagccaagcacccag
agcgtgatcccgtcttctgctccgtatgttcaagggatggaaacgtggctggaaacgtcg
agatcctgccgggtggatcagcccggcggccagcatttggctcagtgttcattctcaccg
aatatcaaagaggaaagcgcgtattgcctttatgagtctgacaaatgtcctaaaggagca
acggtggatgacgtttcctactcgactgcatcgtgcccggttaccggcagcactttgcca
gtccccggctacttccgcctgtctcagacatacgcgtcctccaggctgtaccatgatgtc
cagccaaacgtgaatcactttactctgcaacgacctgcccgtctcgacagccagccctcc
cagccccagactgctgctgcggagccggagcgcagggagagccacgaggaggcgcctgtc
ccggcgccctgcgccccggccagggaggcggacaaccgcctctcctccgagacctcatcc
tcccctgagcccgctgagagctgcagcgtgggctgtccagagaaaccagtcaaaggagat
ggaaaaatgcaaagtacggccaactggctcacagctaagagtggccgaaaaaagcgttgc
ccctataccaagcaccagactctggagctggagaaggagtttctcttcaacatgtacttg
acaagagagcgtcgtctggagatcagccgcggtgtgaacctcactgacaggcaagtcaaa
atctggttccaaaacaggaggatgaaactgaaaaaaatgagccgagagaataggatccga
gagctctccaacaacttcagtttctcatga
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