Pseudoliparis swirei (Mariana hadal snailfish): 130213045
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Entry
130213045 CDS
T09868
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130213045 (prdm13)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130213045 (prdm13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-BED
Zf-C2H2_ZNF451
DUF2199
GPS2_interact
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
130213045
NCBI-ProteinID:
XP_056300401
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All DBs
Position
22:19489241..19496156
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AA seq
638 aa
AA seq
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MVLISAHAMQATRASTTVSVFADCSVPAGLRIGPVPGVFKLGKYVSDRKEVGPKKKIRLV
RGEFVDDSGCPVPDWIGLIRAARNSQEQNLEAVSDLPGRQIFYRVLREIPAGEELSVWYS
AAVAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVSSE
QARGTETFSRSPKSGDIPNTSTSPRSGHSNSSISDSGRRAVSSSPFPHKAGLSKKRSAEE
QDRALDMSVTSARNQGHILGFGATSSVLSSMGFHPGVRSAFKPTGVSKVPGADASREDAN
GKLGGLGFSKLIGNHLKPIRNVSETLNGGGSHPHKRAPAIMDPASPMVPCTNAIRGFPLL
PHMEETSAFKHVESRMHSGLSPSRYPQMPPGLHFDRFSLPHFDGVKTYGADCNIPLMPLT
VYNGELLYSSPYYPLKFHFSNLLKYPESMSYFGAPSLNHDLGSITNIDREIAMHTQQLSE
ITAEKNRTRLDSMPAGSASNAGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKC
KVCFRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTVKKLEE
KAGGLFEDEEQKSDNDSDVDVCFTDDQSDQESSKNNDD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctcagctcacgccatgcaagccacccgggcgtccaccaccgtcagtgtg
tttgcggactgcagcgtcccggccgggctccggataggaccggtaccgggcgtcttcaaa
ctcgggaagtacgtgtcggaccgcaaggaagttggacctaaaaagaagatccgcttggtg
cggggggagttcgtggatgactcgggctgtcccgttccagactggatcggactgatccgc
gctgccaggaacagccaagagcaaaacctggaggctgtgtcggatttacctggcagacag
attttctaccgcgtgctgagagagatccccgccggagaggagctcagtgtgtggtactcc
gccgcggtggcccagtggtacgacatccccaccaccgccacgccgacgcacgacgagaaa
ggtgaggagcgctacatctgctggtactgctggagaatcttcaagtacccgaacacgctc
aaggcccacgtccacttccactgcgccctgagcaacggtcgggggtttgtgtccagcgag
caggccagaggcacggagaccttcagcaggtcgccgaagtccggagacatccccaacact
tccacctctccgaggagcggccacagtaactcctccatatcagactctggcaggcgggcg
gtgtcctcctcgccgttcccgcacaaagcgggcctgtcaaagaaaagaagcgcagaggag
caggacagggccctcgacatgagcgtcacctcagccagaaaccaaggacacatcctcggc
ttcggcgctacatcctcggtgctgagcagcatgggcttccatccgggtgtgcgctcggcc
ttcaaacccaccggcgtctccaaagtcccgggcgcggacgcctccagagaggacgcaaac
gggaagctgggcggcctgggtttcagcaaactcatcgggaaccacctgaaaccgatccgc
aacgttagcgagactctgaacgggggagggagccaccctcacaagcgcgcacctgcaatc
atggaccccgcatctccaatggtgccatgcactaacgcaatccgaggtttcccgctgctg
cctcacatggaggagacctcggcttttaagcacgtcgagagtcggatgcactccggcctg
tccccgtcccgctaccctcagatgccccccggactccacttcgatcggttctccctccct
cacttcgacggcgtcaagacttatggcgcagactgtaacatcccactcatgcccctcacc
gtctataacggggagcttctgtacagctcgccgtactacccgctgaaattccacttcagc
aacctactcaagtacccggagtccatgtcctacttcggcgcgccctcgctgaaccacgac
ctgggctccatcaccaacatcgaccgggagatcgcgatgcacacgcagcagctgtccgag
atcaccgcggagaagaaccggacgaggttggactcgatgcccgctgggagcgccagcaac
gccggctctggcaaaccgaaaaagggacacctgtgtctgtactgcggcaagctgtactca
cggaagtacggactgaagatccacatgaggactcacacggggtacaagccgctcaagtgc
aaggtgtgcttccggccgtttggcgaccccagcaacctgaacaaacacatccggctccac
gcggaggggaacacgccgtacaggtgcgaattctgcggcaaggtgctggtgcgcaggcgg
gacctggagaggcacgtgaagtccaggcacccggggcagaccgtcaagaaactggaagag
aaagcgggcggcctgttcgaggacgaggagcagaagagcgacaatgacagtgacgtggac
gtgtgcttcaccgacgaccagagcgaccaggagtcgagcaaaaacaatgatgactga
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