Pseudoliparis swirei (Mariana hadal snailfish): 130213118
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Entry
130213118 CDS
T09868
Symbol
zgc:158766
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B isoform X1
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130213118 (zgc:158766)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
130213118 (zgc:158766)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
RHG20_PH
IQ_SEC7_PH
PH_10
Motif
Other DBs
NCBI-GeneID:
130213118
NCBI-ProteinID:
XP_056300534
LinkDB
All DBs
Position
22:complement(11407824..11433259)
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AA seq
1760 aa
AA seq
DB search
MLSLGKMHSRAKSRSCDNYLSIKQMRTYQTTGMYMVTIDTESLDSCIQSTLSALYRPFSA
TAATVLWQLFSVVERQYRGDGLRCLIDFLLPGKRILQIIQQETCVKFRGLLFYHEGWPLC
IKEKVVLQLAPLHKVRLKQGDFYLQIVPLGRKTAKLVIKCLSVSGQAITEVTVAESMYGS
VFTAEFLQNVTRDRNLHPLQNCLLTTGTAVYRTPWKNVVNPLFVSSTADAIMQARCSRGG
FRGHLSTCSTSGSTGTLDSHRSSRESLHSQGADSIFSEPTSPNKHHLDPSSENHSVGSPD
TATPIIEIERSTEECGIGSEDSGGRERGPGSKMLSFTTDLSNPGPRRRLPRDSVAFESRR
LFRKSYMEALQNPMSLGSSSEFILEESPEHGAGLRESSVTPGSSPDIRSPSREHLSRRLG
SRSWLSGDDSRTSTPLLYLQRGLRSAERRAERRSKSLERTNKAIQVKGHRERSSSGGSAS
TSPKKLINGYALRFGKLDVEAAFSGSEKRTSKEESGQRDDTISSESRRHRHSGEDSYSPK
AANGPAIRPASASGSSNESDSARPKLVSEVNEKLLVSGAVILPGNRDRSGRAVLQVCTRA
QVWAGESCTVKDLTCLLGYYYSTLRKERRDQGLTVVIDSRRQQPVPALMSSLSELQASAP
NALYTVLFLVDKETAAKPERDIDVQTETMSSLKALLKHIDQTQLTQHLEGTFHYDHSHWI
HFRQKIDSFASSCSASISSLQESISTLSGSGNLTTSKEVSEVLEQQRHLMKCVLEDTRLN
RLRLEGGTVLARIRKEEACENENYRDAVDMLNALYNQVDEEVHKLVILSNKSQKQLEGLL
EVRTFEEQTQKIKLWFSVEGEKQLTPLESLTLSVAKVKEMRETLDQFLEETVHKQRLALQ
LVKEAPESLPGSVLLDFEQHLGSILSRVERRKAQLDILTNLNEFYDSANQWMEHCQDYFG
HLSLDSSDVELLPSVVQILQDYYTEASKFSMDNFSSLNNMVLSLESPQQLQQWNTVWHKC
QQTKQQLEERLARARTAAPDFTVDTVASLKISESQTTTTEQRGAKACVLLPVLIPPFEDN
KPHSAGPFSKSPTSSISSSSHFPFSPECDSKLRQSPSIFDDTDSDCTIDSTISCHSEPVY
SGAARLRKQPMKKIMKKTMSFELTPRDSGHSDVSHIHGYTGVYIKGLEVANNVSAEKKLQ
RPDILSPAFGRSRSMSSPSRIHSRHSDGEGKKHSSKVQHIMDEMISTESEYVRSLSYIIE
HYFAEMERPDLPQDLRGKRSIIFGNVEKLWDFHSQYFLKELESCAHSPLSISSCFLRHED
QFGMYALYSKNKPQSDELLSSHGNEFFKNKQLELGDKMDLASYLLKPIQRMSKYALLLKD
LIKECGQSQEQELSDLRTAEEMVKFQLRHGNDLLAMDAIRGCDVNLKEQGHLRCQDEFIV
WCGRRKYLRHVFLFEDLILFSKTKKIEGGYDFYIYKQSFKTAEIGMTENVGDSGLRFEIW
FRRRKSQDTFILQASSAEVKAVWTAIIGKILWRQALRNRELRIQEMVSMGIGSKPFMDIK
PSDAAISDRAIDYIMKGTEARTRASIAVSSFDHSTSFKRPHSTISNSSTSSSSSQSSSSL
LGSLNLHLYSSPSHPYLVTSVPSFAQWPYDCIEEDELEQDSGSQPSMITESSETSSQCTS
SDSVTGLSTLTIPGHPSSVMDSYNNNNNNEPPTFLCSSTTSSSIASPSIFQKEEELQPQG
TKFITASEASHIAVGLSTVV
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcactgggcaaaatgcactccagagcaaagtcccggagttgtgacaactacctg
agtattaagcaaatgcgaacataccaaactacagggatgtacatggtaaccatagacact
gagtctttggacagctgtatccagagcaccttgtcggccctgtaccgccccttcagtgcc
accgctgccacggtcctgtggcagctcttcagtgtggtggaaaggcagtaccgaggagac
ggcctccgctgcctcatcgacttcctgcttcctggcaagagaatcctgcagatcatccaa
caagaaacctgtgtgaagtttagaggattgctgttctaccatgaggggtggcctctctgc
atcaaagagaaagtcgtcctgcagctcgcccctctgcacaaagtgcgcctaaagcaagga
gacttctacctacagattgtccctttaggccgcaagactgcaaagctcgtaataaaatgt
ctgtcggtcagtgggcaggccatcacagaggtcaccgtcgcagagagcatgtatggcagt
gtgttcacagctgagttcttgcagaatgtaacacgtgaccgtaacctgcacccactacag
aactgtctgcttaccactggtacggctgtgtacaggacgccgtggaagaacgtggtcaac
ccactgtttgtcagcagcacggcggacgccatcatgcaagcacgctgcagcagaggtggc
ttccgcggccatctcagcacctgcagcaccagcggatccacagggactctcgacagccac
cgcagctccagagagtctctgcactctcagggagctgactccatcttctctgagcccacc
tccccaaacaaacaccatttggaccccagcagtgagaaccacagtgtcggttcaccagac
acggctacacctatcattgaaattgaaaggtccactgaagagtgtggaataggaagtgag
gatagtggcgggagagagagagggccagggtccaagatgctatctttcactacggacctc
agtaaccccggacctcgacgacgcctaccaagggactctgttgcatttgagagcaggaga
cttttcaggaaatcttacatggaggccctgcagaaccccatgagcctcgggtcaagctct
gaattcattctggaggaaagcccagagcatggtgctggtctaagagagagctcagtgaca
ccagggagcagccccgacatacggtctccctctagagaacatttatctcggaggttgggt
agccggagctggctcagcggtgatgactccagaaccagcacacctttactttacttacag
agggggttgaggagcgcagagagacgcgcagaaagacgctcaaagtcactggagaggact
aacaaggcgatccaggttaaaggtcacagggaacgatcttcttctggaggctcagcgagc
acctccccaaaaaagcttataaatggctacgctcttcgttttgggaagctcgatgtggag
gctgctttttctggctctgagaagaggaccagcaaagaggagtcaggacagcgcgatgac
accatcagcagtgagagcagacggcacaggcacagtggagaagattcgtacagcccaaaa
gctgccaatgggccggccatccgaccggcttcggcatcaggctcctccaatgagagcgac
tcagcccgccccaaactggtgtcggaggtcaatgaaaagctgctcgtatcgggtgctgtg
atcctgccaggaaacagagatcgcagtgggagggcagtgctgcaggtgtgcacacgagct
caggtgtgggcaggtgaaagttgcacggtcaaagacctcacctgtttattgggctactac
tattccacgctgcggaaggaaaggcgtgatcaaggcttaactgttgtaatagacagcagg
aggcagcagccggttccagctctgatgtcatctctgtctgagttgcaggcgtcagcacca
aatgcactttacactgttctcttcctggtggacaaggagacagcagccaaacctgagaga
gacatcgatgtacagactgaaacaatgtcctctctgaaagccctgctgaagcacatcgac
caaacccagctcacacaacacttggagggcaccttccactacgaccacagccactggatc
cacttcagacagaaaattgactcatttgcaagcagttgtagtgcatccatctcctccctc
caggagtctatcagcacactgagcggcagtggcaacctgacgacctcgaaggaggtgtct
gaggttttggaacagcagaggcatctcatgaagtgtgtgttagaggacacccgtctaaac
agactgcgtctagaaggaggaactgtcctcgcacgcatcaggaaggaagaagcctgtgaa
aatgaaaactacagagatgctgtcgacatgttgaatgcactgtacaaccaagtagatgaa
gaggtccataagcttgtgatcctctcaaacaagtctcagaaacagttggagggcctgctg
gaggtgcgcacgtttgaggagcaaacgcaaaagatcaaactctggttcagtgtcgaagga
gagaagcagctcacaccgttggaatcgctaacgctgtccgtggccaaagttaaggagatg
cgggagaccttggaccagtttcttgaggagacggtgcacaagcagaggctcgccctgcag
ctggtgaaggaggctcccgagtcccttccaggttcggttctccttgactttgagcagcat
ctgggctccatcttaagccgagtggagaggaggaaggcccagctagacatcctaaccaac
ctgaatgaattctatgactcagcaaaccagtggatggagcactgccaggattattttgga
cacctgagtctcgactcttcagatgttgaacttttgccatctgtggtgcagatcctgcag
gattactacaccgaggcatccaagttctccatggacaacttcagcagtctcaacaacatg
gtgctctccctggagagccctcagcagctgcagcagtggaacacagtgtggcacaaatgc
cagcaaaccaaacagcagttggaagagaggttggcccgagccaggacagcagcccctgac
ttcactgttgacacggtggcttctttaaagatttctgaaagccagacgaccactacagaa
cagcgtggagcgaaagcctgtgtgcttttacctgtgctaattccaccgtttgaggacaac
aagcctcactctgctgggcctttctccaagagcccaaccagttcaatttcctcttcctca
cacttcccgttctcccccgaatgcgacagcaaactgagacagagtccatccatttttgac
gacacagacagcgactgcaccatcgactcgaccatatcgtgtcactcggagcccgtctac
tccggtgcagcccgcctccgcaagcagccgatgaagaagatcatgaagaagaccatgagc
tttgagctgaccccgagggacagtggtcactcagacgtcagccacatccatggctacacg
ggtgtgtacatcaagggcttggaggtggctaataacgtgtctgcagagaagaagctgcag
agacctgacatattgagccctgcattcggacgcagccgcagcatgtcgtcgccctccagg
atccacagcagacacagtgacggagagggcaagaaacatagcagtaaagtacagcacata
atggatgagatgatctccacagagagtgagtatgttcgctctctcagctacatcattgag
cactattttgccgagatggagcgcccggacttgccgcaggacctgcgggggaagcgcagc
atcatttttgggaatgttgagaaactgtgggacttccacagtcaatatttcctgaaagag
ctggagtcatgcgcccactccccgctgtccatcagtagctgttttctcagacacgaggat
cagtttggaatgtatgctctgtacagcaagaataagccgcagtccgacgaactgctcagc
agccatgggaacgaattctttaagaataagcagctggagctcggagacaagatggacttg
gcgtcctacttgctgaagcccatccagaggatgagtaaatacgcgctgttgctgaaagac
ctgatcaaggagtgcggtcagtcccaggagcaggagctaagcgacctccgcaccgcagag
gagatggtcaagtttcagcttcgccatggcaacgacctgctggctatggatgccattcgg
ggctgtgatgtgaacctaaaggagcagggtcacctccgctgccaggatgaattcatagtc
tggtgcggacggaggaaataccttcgccacgtcttcttgtttgaagacctcatcctcttc
agcaagaccaagaagatcgaaggaggatatgacttttatatctacaaacagtccttcaaa
acagcagaaataggtatgactgaaaatgttggcgacagcggcctacgctttgagatctgg
ttccgtcggaggaagtcacaggacacgtttatactccaagccagctccgccgaggtcaag
gctgtctggacagctatcatagggaagattctgtggaggcaggcgctcagaaacagagag
ttgcgcatacaggagatggtgtccatggggattggaagcaagccttttatggacataaag
ccaagtgatgcagctatcagtgacagagccattgactatatcatgaaagggacagaggcc
cgcaccagggcatccattgcggtgtcttcgtttgatcactccacttcgttcaagagacct
cactccacaatctccaacagcagcacctcctcctccagcagccaatcctcctcctccctt
ctgggctcgctcaatcttcatctttactcctccccctctcacccctacttagtgaccagt
gttccctcctttgcccagtggccctacgactgcatcgaggaagatgagctggagcaggac
tccgggagccagccctccatgatcactgagagctcagagacgtcctcccagtgcacctcc
agtgacagtgtaacaggcctgagtaccctcacgatacccgggcaccccagcagcgtcatg
gactcctacaacaacaacaacaacaacgagccccccactttcctgtgctcctccaccact
tcctcctccatcgcatccccctcgatattccagaaagaggaagagctccaaccccagggc
accaagttcatcacagcaagcgaggcctctcatatagcggtaggcctctctactgtggtg
tga
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integrated database retrieval system
