KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130213167
Entry
130213167         CDS       T09868                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    130213167 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pswi04131]
    130213167 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130213167 (rab13)
   04031 GTP-binding proteins [BR:pswi04031]
    130213167 (rab13)
Membrane trafficking [BR:pswi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    130213167 (rab13)
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130213167 (rab13)
  Exosomal proteins of colorectal cancer cells
   130213167 (rab13)
GTP-binding proteins [BR:pswi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    130213167 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 RsgA_GTPase PduV-EutP AAA AAA_7 Septin FeoB_N AAA_22 SecDF_P1_head
Other DBs
NCBI-GeneID: 130213167
NCBI-ProteinID: XP_056300610
LinkDB
Position
22:13338916..13345600
AA seq 200 aa
MAKKYDFLYKLLLIGDSGVGKTCLIIRLADDNFNSTYISTIGIDFKVKTIEVGGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDGKSFENIQNWMKSIKENASSGVNQMLLG
NKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVDESFLALASDILQKSSKKPGPT
GREVKITSRTERKSSKCILL
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgaagaagtatgatttcctctacaaattgttgctcatcggggacagcggagtgggg
aaaacttgtctgatcatccgcttagccgatgacaatttcaactccacgtacatctccacc
atcggcatcgactttaaagtaaaaaccattgaagtgggtggaaagaaagtcaaactacaa
gtctgggacacagccggacaggagaggttcaagaccatcacaacggcctactacagagga
gccatgggcatcatcctggtgtacgacatcacagacggcaagtccttcgaaaacatccag
aactggatgaagagcatcaaagaaaatgcctcatctggggtcaatcaaatgttacttggc
aataagtgcgacattgaagcaaagcggaaagtttccaaggagacgggagaaaagttggca
aaagatcatggcatcaggttctttgagaccagtgcgaagtctagcatcaacgtggatgag
tcttttctcgctttggcaagcgacatactacagaaatccagcaagaaaccgggccccaca
ggtcgagaggtgaaaatcacaagcaggacagaaagaaaatcttccaaatgcattcttctc
tag

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