Pseudoliparis swirei (Mariana hadal snailfish): 130213170
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Entry
130213170 CDS
T09868
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130213170
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130213170
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
SPA
Motif
Other DBs
NCBI-GeneID:
130213170
NCBI-ProteinID:
XP_056300612
LinkDB
All DBs
Position
22:complement(64575..119700)
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AA seq
1434 aa
AA seq
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MTEEKCPQLVDYFVVAGLDPAGAWRPLDEDAKTCTSSCSSSSRAVESVTDLAVIARGLGE
EVPEGFTCIERTLGGHSAELSAGLINNPHLYLCYRRGRDKPPILDLGVLYEGKDQLKQSW
YVIETTPYSRSASLSSGGAPTAHRVFLTYRRALDSQGLHMLGVTDIGLLLPSKGEVAPHT
FCRVDKNLNTGMWGPALYVCYKRAVAKANALLYKASLISRYPDEDLVAFPLPESVPLFCL
PMGVTVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRELLSERQSVRLGLL
SVVDRRPITNRSLQVKKSICVLSQWPFFTVFQKFLTFIYRYSISGPHVLPLEKHISSFMH
NVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPDHACSLLLAVLL
EHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPMPFIVGVHSSY
FDLYDPPTDVVCVDLDTNTLFQSDEKKPLSWRSLPRKHGKTLFNSLSVLHKTLEKICTPG
QEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFMSGLLRGYRSFLLPITQAPSDTTTDC
SSLFNLQGFLKSRDRTQQKIYGQLTRTQMFTQFIEECSFGSDRHACLEFFDECVQKVDVE
KPEEVRLIDLDETHGGEHTVFIMPPEEPQEPDGSECPALYSYETFPALKPELLQRPQDQI
RVPAKGSAPSSPAPRRTKQEIKLAQKRAHKYSAVPDMWSKCLLGHCYGLWFIYLPTFVRA
EAAKVRALHTAHDMLKHMENRKVVLPDEVCYRILMQLRYITPCTVLQQGIYTITHEATMD
PDQRPLPHLTLIRQSSWSVMSESCSHESLTGSMLKSSSLSSMKTPTDKVKLCTKTIHRLA
GSNGCCDSVSCKPPMGHRDTSSRPAAPPSGLLVRRSQVCLSTFYKDCAESADSEPDGSCQ
PAERGGRPEGTRDSAGRNKAVDENYNNVSSPPRGGLAGKLQQLLTPTRHRALVRRAASVD
DRRPAGRGGRTVSQQRPSRKTQVAETLLKAKERLVSATSESSLSVGSDLDLTDTPCPAFP
LRRSWDAGQEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSASFVP
FLNAELCDLGPVGSVERANWNMEDEVESAARPPSGQEASLRGDSSSETSSYSESSRTTTA
SSVGGAPQVTVAYLSPLVLRKELESLLENEGEAVLAQPQFLENHSIIFWNLLWYFQRLGL
PSNLLQLVSASPLGRQVTQVENCAVRVRLLWDTLAPDTEQWPPLYILWRIHSGVPMRSYN
WRRHNHPFTLSFLEEVLRWVGMNEVHKAATLFLDTLAKQPGSAHTQRSLYREFLFLTLAA
MGKDHVAAFDKKYKAAYSRLSGTLGREELRRKRAQPPGPKAVDCRRSFQPPLEC
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagaaatgtccccagctggtggactacttcgtagtagcaggtctcgaccct
gcgggggcctggaggccattggacgaggatgccaaaacctgcacctcctcctgttcgtcc
tcgtccagagcagtggagtcggtgacggatctggcggtcatcgctcgggggctcggcgag
gaggtgccggagggcttcacctgcatcgagaggacgctgggcggccactcggccgagctg
agcgccggcctcatcaacaaccctcacctgtacctgtgctaccgccgaggacgggacaag
ccgcccatcctggacctgggggttctgtatgaggggaaggaccagctgaagcagagctgg
tacgtcatcgagacgacgccctacagccgctcggccagcctgagctctggtggcgccccc
acggctcaccgggtgttcctgacgtaccgacgggctctcgactcgcagggcctccacatg
ctgggcgtcacggacatcggcctgctgctgcccagcaagggagaggtcgccccgcacacc
ttctgccgagtggacaagaacctcaacaccggcatgtggggtccagctctgtatgtgtgc
tacaagagagctgtggccaaagccaacgccctgctctacaaagccagtctgatcagccgc
tacccggatgaggacctggtggcgtttcctctgccggagtcggtgcctctcttctgcctg
ccgatgggcgtcaccgtggagagctggcctctgaacaccaagtaccagctgcccgtcttc
tccaccttcgtcctcacctccgcctctggggacaaggtttacggagcagccatccagttc
tacgagtccttctccagagagctgctgtcagagaggcagagcgtgaggctcggcctcctc
agcgtggtcgaccggcgacccatcaccaaccgcagcctgcaggtcaagaagagcatctgc
gtgctctcccagtggcccttcttcaccgtcttccagaagttccttaccttcatctacaga
tactccatctccgggccccacgtgctgccgcttgaaaaacatatctccagcttcatgcac
aacgtcccgtttccttcgcctcagcggccgcgaattctcgttcagctctctccgtatgac
aacctgctcctctgccagccggtgtcctctcctctcccactcagcggggccagcttcctg
aagctgctccagaacctgggtccggaccacgcctgctctctgctgctcgccgtcctcctg
gaacacaaactgctgctgcactcgctgaggcccgacgtgctgacctccgtcagcgaggcc
ctcgtctccatgagcttccccctgcgctggctctgcccctacatccccctgtgtccgctg
cagatggccgacgtgctgctggccccgatgcccttcatcgtgggcgtccactccagctac
ttcgacctgtacgacccccccacggacgtggtgtgtgtggacctggacaccaacaccctc
ttccagtctgatgaaaagaagccgttgtcgtggcgatcgttaccgaggaagcacggcaag
actctgttcaacagcctcagcgtcctccacaagaccctggagaagatctgcacccccggc
caagaggaggccacgctggagttcctgctgacggactacgaccagatctaccgcagccag
aagcagctggagctggagatccaggaggccttcctccgcttcatgagcggcctgctgaga
ggctaccgcagcttcctgctgcccatcactcaggcgccctccgacaccaccacggactgc
agctcgctgttcaacctgcaagggttcctgaagtctcgggaccgaacgcagcagaagatc
tacggccagctgaccaggactcagatgttcacgcagttcatcgaggagtgctccttcggc
agcgaccggcacgcctgcctcgagttcttcgacgagtgcgtccagaaggtggacgtggag
aagccggaggaggtgaggctgattgacctggatgagactcatggtggagaacacacggtg
ttcatcatgcctccggaggaaccgcaggaacccgacgggtccgagtgtccggcgctctac
agttatgaaaccttccccgccttgaagccggagctcctccaacgaccccaggaccagatc
cgggtaccggccaagggcagcgcccccagcagccccgccccccgccgcaccaaacaggag
atcaagctggcccagaagcgagcccacaagtactccgcggtgccggacatgtggtccaag
tgcctgctgggccactgctacggcctctggttcatctacctgcccaccttcgtgcgggcg
gaggccgccaaggtgcgcgcgctgcacacggcccacgacatgctcaagcacatggagaac
cgcaaggtggtgctgccggacgaggtgtgttacaggatcctcatgcagctaaggtatata
acaccatgtacggtactacaacaaggtatatacaccatcacccacgaagcgacgatggat
cccgaccagaggcccctcccccacttaactctgattcgtcaatccagttggagcgttatg
tccgagagctgcagccatgagtctctgacgggctcgatgttgaagagcagcagtctgagc
agcatgaagacgcccacagacaaggtgaagctctgcacgaagaccatccaccgtcttgca
gggtccaacggctgctgtgactctgtctcctgtaagcctccgatgggacacagggacacc
tccagcaggcctgcggcgccccccagtggcctcctggtccgacggagtcaggtctgcctc
tccaccttctacaaagactgtgcagagtcggccgactccgagccggacggcagctgccag
ccggcagaaagaggcggcagacctgaagggacacgagactctgctggcaggaataaagct
gtggacgaaaactacaacaacgtctcctcccctccccgaggaggtctggcaggaaagctc
cagcagcttctcacgcccacgagacacagagcgttggttcgacgagccgccagcgtagac
gaccggagaccagcaggacgggggggacggacggtgtcccaacagagaccgtccaggaaa
actcaagtggctgaaacattgctgaaggctaaggagaggctggtcagcgctacctcagag
agttcgctgtctgttggaagtgacctcgacttgacggacacgccctgtccagcctttcct
ctgcgccggtcttgggacgccggccaagagggggcggggctggaggtgctgatgtccagc
tgctctctgtgtcgcagctgtaactctctggtttatgacgaggagatcatggccggatgg
acgtcggacgactccaacctgaactcgtcctgcccgttctgcagcgcgtcctttgtcccc
ttcctgaacgctgagctctgtgacctgggacctgtgggcagtgtggagcgcgccaactgg
aacatggaggatgaggtggagagcgctgcgaggccccctagtggtcaggaggcgtccctg
cgtggagactcgagctccgagaccagcagctactcagaaagcagcagaaccaccacggct
tcctcggtgggcggcgccccccaggtgacagtggcctacctgagccctctggtcctgagg
aaggagttggagagtctgctagagaacgagggtgaggcggtcctggcccagcctcagttc
ctggaaaaccactccatcatcttctggaacctgctgtggtacttccagcgcctcggtctg
cccagcaacctgctccagctggtcagcgcctcgccgctgggccgccaggtcacacaggtg
gagaactgtgcagtgagggtgaggctcctctgggacactctggcccccgacacagagcag
tggccccccctctacatcctctggaggatccacagtggcgtcccgatgagaagctacaac
tggcggagacacaatcacccgttcacgctgtccttcctggaggaggtgctgcgctgggtc
ggcatgaacgaggtgcacaaagccgccaccctgttcctggacacgctggccaagcagccg
ggctccgcccacactcagaggagtttgtacagagagttcctcttcctcactctggcagct
atgggcaaagaccacgtcgctgctttcgataagaagtacaaggcggcgtactctcggctc
agtggcactctgggtcgggaggagttgcgtcggaagcgggctcagcctcccggccccaag
gccgtggactgcagacgcagcttccagccgccgctcgagtgctga
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