Pseudoliparis swirei (Mariana hadal snailfish): 130213180
Help
Entry
130213180 CDS
T09868
Symbol
pik3r4
Name
(RefSeq) LOW QUALITY PROTEIN: phosphoinositide 3-kinase regulatory subunit 4
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04136
Autophagy - other
pswi04140
Autophagy - animal
pswi04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130213180 (pik3r4)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130213180 (pik3r4)
04136 Autophagy - other
130213180 (pik3r4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130213180 (pik3r4)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130213180 (pik3r4)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130213180 (pik3r4)
Protein kinases [BR:
pswi01001
]
Serine/threonine kinases: Other
VPS15 family
130213180 (pik3r4)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130213180 (pik3r4)
Autophagy
Autophagosome formation proteins
PI3K complex
130213180 (pik3r4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
HEAT
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_TEP1_2nd
PK_Tyr_Ser-Thr
Beta-prop_IFT140_1st
EIF3I
NBCH_WD40
Beta-prop_EIPR1
Herpes_LP
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_EML
HEAT_2
HEAT_EZ
APH
TCAD9
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
130213180
NCBI-ProteinID:
XP_056300621
LinkDB
All DBs
Position
22:complement(788527..846989)
Genome browser
AA seq
1282 aa
AA seq
DB search
MGNQLAGIAPSQILSVDSYFSDIQDHEYDKSLGSTRFFKVARATHREGLVVVKVFAIQDP
SLPLTSYKQELEELKIRLHSCQNCLPFQKTSLTEKAAILFRQYVRDNLYDRISTRPFLNN
VEKRWLAFQILNAVEQAHRAGVRHGDIKTENVMVTSWNWVLLTDFASFKPTFLPEDNPAD
FNYFFDTSRRRTCYIAPERFVDGSMFATENDQNTPLVDLSHGSQRSRGELRPAMDIFSAG
CVIAELFTEGVPLFDLSQLLAYRNGHFQTEHVLLKIEDRSIRDLVAHMVQREPGRRLQAE
AYLQQQRGKAFPDIFYTFLQPYMAQFAKDAFQSADERVLVIRKDLDNILLNLHGGEQRPP
GPAGSPLGADGPLPAPSPREERGLTVLVSVITSCLQSLQSCDSKLAALELVLQLAPRLAV
AVLLDRIAPYLLHFCSDPVPRVRAQAVRTLARVLALVKEVPRNDVNIYPEYILPGIAHLA
QDHATVVRLAYAENIAHLAESALRFLELVQENNVNAESEPSGEDPEEALHQKANDSLLSA
RGDLDLNDKHDWHLRGAFFDSIVGVAAYVGWQSSSLLKPLLQQGLSDTEEFVIYKALNAL
TCMCQLGLLQRAHVYEFVCDIGESLSLSSSTCPLPPVLFHLSSTTCPLPPVPLTCPPQID
KELVLLSVLKEPVSRSIFDYALRSRDIGSLFRHLLLRQKKRGGLIPECPTPEDPSIGQLL
KKLLSQGMTEAEEDQLLALKDFMLKSNKAKANMGEQSQLGEAAHTGVIDLATLGITGRQV
DLVKGKAEPEDKRARKHPKQHDAAMNEEWKSMFGSQEPPCALLPCTVADGPAGPAGPAGP
AGPVLQEATGSSYQRRTNTCRVELQQLVQQKREQCSAERVAKHMMESAEWESRPPPPGWH
PKGLLVAHLHEHKAAVNRIRVSDEHSIFSTASNDGTVKVWDSQKMEGKTTTTRSVLTYSR
IGGHVKTLTFCQGSHYLAVASDSGSIQLLAVEAHKPPKSPKVQPFQTRSLDLQKDGCAVD
IHHFNSGAQSVLAYATVNGSLVGWDLRANANAWTLRHDLRLGLITSFSVDIHQCWLCLGT
SSGTMACWDMRFQLPISNHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSMWDMETGDR
KFTLWASSAPPLSEMQPSPHSVHGVYCSPADGNPLLLTAGSDMRIRFWDLAYPERSYIVV
GGANDSLHCPSVLYSRKIIEGTEVVQEIHSKQKSGAVEDSPRRGPESLPVGHHDIITDIA
TFQTTQGFIVTSSRDGIVKVWK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccagctggcgggcatcgccccctctcagatcctgtccgtggacagctacttc
tctgacatccaggaccacgagtacgacaagagcctgggcagcacgcgcttcttcaaggtg
gcccgggccacgcaccgggagggcctggtggtggtgaaggtgttcgccatccaggacccc
tcgctgcctctgaccagctacaagcaggagctggaggagctgaagatccggctgcactcc
tgccagaactgcttgcccttccagaagacctcgctgacggagaaagcggccatcttgttc
cggcagtacgtgcgggacaacctgtacgaccgcatcagcacgcggcccttcctcaacaac
gtggagaagcgctggctggccttccagatcctcaacgccgtggagcaggcgcacagagcc
ggcgtgcggcacggcgacatcaagacggagaacgtcatggtgaccagctggaactgggtg
ctgctcaccgacttcgccagcttcaagcccaccttcctgcccgaggacaaccccgccgac
ttcaactacttcttcgacacctccaggcgccggacgtgctacatcgcccccgagaggttc
gtggacggcagcatgttcgccaccgagaacgaccagaacacgccgctggtggacctgagc
cacggcagccagaggagccgaggggagctccggccggccatggacatcttctccgccggc
tgtgtgatcgccgagctcttcaccgagggcgtgccgctcttcgacctgtcccagctgctg
gcctatcggaacggacacttccagacggagcacgtcctgctgaagatcgaggaccggagc
atccgagacctggtggcccacatggtgcagcgggagcccgggcgccggctgcaggcggag
gcgtacctgcagcagcagcgggggaaggccttcccggacatcttctacaccttcctgcag
ccctacatggctcagttcgccaaggacgccttccagtccgcggacgagcgcgtgctggtg
atccggaaggacctggacaacatcctgctgaacctgcacggcggcgagcagcgcccgccc
ggacccgccgggtccccgctcggcgccgacggccctctgcccgcgccgagcccccgggag
gagcggggcctcacggtgctggtgtccgtcatcacttcctgtctgcagtctctgcagtcc
tgcgactccaagctggcggccttggagctggtcctgcagctggccccgcggctggccgtg
gccgtgctgctggaccgcatcgcgccctacctgctgcacttctgcagcgaccccgtgccg
cgcgtgcgcgctcaggccgtgcgcacgctggcccgcgtgctggcgctggtgaaggaggtg
ccgaggaacgacgtgaacatctaccccgagtacatcctgccgggcatcgcccacctggcc
caggaccacgccaccgtggtccggctggcgtacgcagagaacatcgctcacctggcggag
agcgcgctgcggttcctggagctggtccaggagaacaacgtgaacgcggagagcgagccg
agcggagaggacccggaggaggcgctgcaccagaaggccaacgactcactgctgtccgca
cgcggtgaccttgacctcaacgacaagcacgactggcacctccggggggccttcttcgac
agcatcgtgggcgtggcggcctacgtgggctggcagagctcctccctcctgaagcccctc
ctccagcagggcctgagtgacacggaggagtttgtgatctacaaagctctgaacgctctg
acctgcatgtgtcagctggggctgctgcagagagcccacgtgtacgagttcgtctgcgac
atcggtgagagtctgtctctgtcctcttccacctgtcctcttccacctgtcctcttccac
ctgtcctctaccacctgtcctctaccacctgtccccctcacctgtccccctcagatcgat
aaggagctggtcctcctcagcgtgctgaaggagccggtcagtcgctccatcttcgactac
gctctgcgctccagagacatcggcagcctcttccgccacctgctgctccggcagaagaag
cgcggaggtttgattcccgaatgcccgacacccgaagacccgtccatcggccagctgctg
aagaagctgctctcacagggcatgacggaggcggaggaagaccagctgctggcactcaaa
gacttcatgctgaagtccaacaaggccaaagccaacatgggggagcagagccagctgggg
gaggcggctcacaccggcgtcatcgacctggccacactcggcatcaccggccgccaggtg
gatctggtgaaaggaaaggctgagcccgaggacaagagagcgagaaagcacccgaagcag
cacgacgccgccatgaacgaggagtggaagagcatgttcggctcccaggagccgccctgc
gccctgctgccctgcacggtggctgacggtccggcgggtccagcgggtccagcgggtccg
gcgggtccggtcctgcaggaggccaccggctcctcctaccagcgccgcaccaacacttgc
cgggtggagctgcagcagctggtgcagcagaagagggagcagtgcagcgccgagcgggtc
gccaagcacatgatggagagcgccgagtgggagagccggccgccgcccccagggtggcac
cctaaggggctgctggtcgctcacctccacgagcacaaagctgctgtgaaccgcatcaga
gtctcagacgagcactccatcttctccacggcatcgaacgacggcaccgtgaaggtctgg
gacagccagaagatggagggcaagaccacgaccaccaggtcagtgttgacctactcccgt
atcggcggccacgtgaagaccttgaccttctgccaggggtcgcactacctggcggtggcc
tcggacagcgggtccatccagctgctggcggtggaggcccacaagccgcccaagtccccc
aaagtccagcccttccagaccaggtctctggacctgcagaaggacggctgtgcggtggac
atccaccattttaactctggcgcccagtcggtgctggcctacgccaccgtcaacggctcg
ctggtgggctgggacctccgcgccaacgccaacgcctggacgctgcgccacgacctgcgc
ctgggactcatcacctccttcagcgtggacattcaccagtgctggctctgcctagggacg
agcagcggcaccatggcctgctgggatatgcggttccagctccccatctctaaccactcc
cacccggcccgagcacgaatcagacgactgctgatgcatccgctctaccaatcatctgtc
atcgcagcggtccaggggaacaatgaagtgtccatgtgggacatggagaccggagatcgt
aaattcaccctctgggcgagctctgcccccccgctctctgagatgcagccgtctcctcac
agtgttcatggggtctactgtagtcctgctgatgggaaccctctgctgctgaccgctggg
tctgacatgaggatcaggttctgggacttggcgtacccggagaggtcctacatcgtggtg
ggaggagccaacgactcgctgcactgtccgtccgttctctacagccgcaagatcatcgag
ggaaccgaagtggtccaggagatccacagcaaacagaagagcggcgcggtggaggactct
ccccgccgcgggccggagtccctccctgtgggacaccatgacatcatcaccgacatcgcc
accttccagaccacgcagggcttcatcgtcacctcatccagagacggcatcgtcaaagtg
tggaagtga
DBGET
integrated database retrieval system
