Pseudoliparis swirei (Mariana hadal snailfish): 130213209
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Entry
130213209 CDS
T09868
Name
(RefSeq) sialic acid-binding Ig-like lectin 5
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130213209
04091 Lectins [BR:
pswi04091
]
130213209
CD molecules [BR:
pswi04090
]
Proteins
130213209
Lectins [BR:
pswi04091
]
I-type lectins (Siglecs)
130213209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
IIGP
V-set
ig
I-set
Ig_2
Ig_CD22
C2-set_2
C1-set
C2-set_3
BARF1_ig2
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
130213209
NCBI-ProteinID:
XP_056300659
LinkDB
All DBs
Position
22:complement(2921966..2930034)
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AA seq
924 aa
AA seq
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MFVLIWTALLFCVRDVTADTGESVKGLQTCGKGFCITLSEGEITAEAGLCVVIPCSFTTG
HGFTPQYMVWFKCEPFKTKCGDIIFHTNKNNKKVQSEFLGRVSLLEPDVMKRNCSIIINN
LTESDSGFYQLRVNGATKDKKDGFTFSTRATVSVKALTQKPSVLIPPLTEGRKATLTCTA
PGLCSGSDPEITWRWRGAGEKDSHITGNITGVTQRRSSTLTFNPSAEHHGTNVTCKVSFT
SSITTEETETLNVAYVKDLRTTGNTSVEEGETLNLTCSVESFPPALITWTMSSETNGHNE
TERTLQNDTESFMQTGSGTNTLSISNVTADASGKYMCRAKYLNITLVKSVDVKVIWFSNI
SKSSGCEVQSGVLTCVCVSEGFPLPTITWPLLESHAEHSVTTSKSGRTVVSVTVSVKDRN
DTTVECVSSNALWEAKENLTVSRIKESKLDDLLYTYLITFVQPQVIVAFLIGTFLSAATC
CLALKCCRSKQKNSGDTAEALEMVKTRRLALIDAGQGVEGDQEKSEEGAQAAGGDVEPRE
AEYSDVKFSLLKRKSPTGEEVIQETTDSEYAEIKKENRAEGRKEEEEKEAKRCMPKEKEE
GGQDVAVYSNVNEIMAEEEGLCSLISPTRLLSEPQRNQQLTTEKTNTSTTGLLRLHPPSL
LTEMADVFRSLNLLETLKESVERNKLSDVKDAVEDLLISRLNLAVIGERGDEKDTFINSL
RGLGSVALEDVAGYPNPRHPDFRLWDLPPAPSTSPFEPKGYMERVRFARYNAVFMTFSQA
PQANAVEVFLEARYFLLLASAMGNETHLEGTRKASLEALASQGVARPKVYLVRPAALEKL
DFPGLLEDMGRDLPEIRAHALLLALPTLTSTVVTQKKEAFKALVWAAASLSGGVSAIPVP
FVASMVDCSVALRILGKAQLGPCT
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttctcatctggacggctctgctcttctgtgtgagagacgtcactgctgacaca
ggagaatcagtgaagggattacaaacatgtggcaaaggattctgtatcactctcagtgaa
ggagaaatcacagcagaggctggactctgtgttgtgataccgtgttctttcactactggt
catggatttacaccccaatatatggtgtggttcaaatgtgaaccatttaaaaccaaatgt
ggagacattatattccacactaacaagaataacaaaaaagttcagtctgagttcttagga
cgagtttcactgttggagcctgacgtgatgaagaggaactgcagcatcatcatcaataat
ctcactgagtccgactctggattttatcaactcagagttaatggtgccacgaaagataaa
aaagacggatttacattctctacaagagcaactgtctctgttaaagctcttacccagaag
ccctcagtgctgattcctcctctgactgaggggcggaaggccacactgacctgcactgct
cctggtctctgctctggttctgatccagaaatcacctggaggtggagaggagcaggagag
aaggactctcacatcacaggaaacatcactggtgtcacacagagacgcagttcaacgttg
acctttaacccttcagctgaacaccacggcaccaatgtcacctgtaaggtcagcttcaca
agcagcatcactacagaggagacagagactctgaatgtggcctatgtgaaggaccttaga
acaactgggaatacaagcgtggaggagggcgagactctgaatctgacctgcagtgttgaa
agtttccctccagctctcatcacgtggacaatgtcttctgagacaaacgggcacaatgag
acggagaggactctgcagaacgacactgagtccttcatgcagacaggaagtggaacgaac
actttgtccatctctaatgtgacggcagacgcttctgggaaatacatgtgcagagcaaaa
tatctgaatataaccctggtgaagagtgttgatgtaaaagtcatatggttttcaaacatc
tcaaaaagctccgggtgtgaggtccagtcgggggtcctgacctgtgtgtgcgtcagcgag
gggtttcctcttcccaccatcacatggccgctgttggagtctcacgctgagcactctgtc
actaccagtaagtcaggccgcaccgtcgtcagcgtcactgtttctgtgaaggatcgcaac
gacactactgttgagtgtgtcagcagcaatgcactctgggaagcaaaagaaaacctcacg
gtcagcagaataaaggagtcgaaactagacgatctgctctacacatatttaataaccttc
gtacagcctcaagtcatcgttgcctttctgattgggacattcctttcagctgccacctgc
tgtttggccctaaaatgctgcagaagtaaacagaagaactctggtgatacggctgaggct
ctggagatggtgaagactcgaaggcttgctctgatcgatgccggtcaaggagtggaaggc
gaccaagagaagtctgaagaaggagctcaggctgccggcggtgacgtggagccaagagag
gcggagtactccgacgtcaagttttccttgctgaaaaggaagagtcccacaggggaagag
gtcatacaagagaccacagactcagagtacgccgagattaagaaagagaacagggcggag
ggcaggaaagaggaggaagagaaggaggcaaaacggtgtatgccgaaggagaaggaggag
ggagggcaggatgtggcagtgtactccaatgtgaatgaaataatggctgaggaagaagga
ctgtgtagcttgatcagcccgactcggctgctgtcagagccgcagaggaaccagcagctg
acgactgagaaaacaaacacgtcaaccacagggctgctccgcctccatccgccgtctctt
ctcacagaaatggccgatgtcttcagaagcctgaacctccttgagaccctcaaagagtcc
gtagagcgcaacaagttatcagatgtcaaggatgcagtggaagatctcctgatcagccgg
ctcaacttggctgtgatcggggagcgcggcgatgaaaaggacaccttcatcaactccctg
cgtggcctcggctccgtcgccctggaggacgtggccggctacccgaacccgagacacccg
gacttccgcctgtgggatctgccgcctgccccgtccacgtctccatttgaacccaaggga
tacatggagcgggttcggttcgcccgctacaatgccgtcttcatgaccttcagccaggcg
ccccaagccaacgccgtggaggtgttcctcgaggcccggtacttcctcctcttggcttcg
gcgatgggcaacgaaacacacctggaggggacgaggaaagccagtttagaagcgctggcg
tcacagggcgtggcacggccgaaagtctacctggtgcggcccgccgccttggagaagttg
gacttccccggcctgttggaggacatgggacgagaccttccggagatccgagcccacgca
cttctcctggctctcccgacgctcacctccaccgtggtcactcagaagaaggaggcgttc
aaagccctggtgtgggcggcggcctcgctatccggcggggtgtcggctatccccgttccc
ttcgtggcctccatggtggactgcagcgtcgcgctgaggattctcggcaaagcccagtta
ggtccgtgtacgtaa
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