Pseudoliparis swirei (Mariana hadal snailfish): 130213266
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Entry
130213266 CDS
T09868
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130213266 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130213266 (grik5)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Glutamate (ionotropic)
130213266 (grik5)
BRITE hierarchy
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
130213266
NCBI-ProteinID:
XP_056300740
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All DBs
Position
22:15734233..15763868
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AA seq
1035 aa
AA seq
DB search
MRRPLPISPSLSAFLAAILDDQSVCGRGERLALALARENINSMMEGPARARVEVDIYELQ
KDSQYDTTDTMCQILPKGVVSVIGPASSPASSSTVSHICGEKEIPHVKIGPEETPRLPYL
RFATVTLYPSNEDLSLAVEAILCSFGYPSASLVCAKAECLLRLEELVRRFLISRETLSIR
MLDDNLDPTPLLKEIRDDKVATIIIDANASVSYHILKKASELGMTSSFYKYILTTMDFPL
LRLDEIVDDQSNIVGFSMFNTTHPFYLEFIRSLNLSWREGCDLTYPGPALSSALMFDAVH
VVVGAVRELNRSQEIGVKPLSCSSPQIWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTN
YTLRILEKHRGGLKEIGVWYSNNTLAMNSTSLDINVSEKLANKTLTVTTILENPYVMRRD
NYQVFQGNDQYEGFCVDMLKELSDILKFSFKIKLVDDGQYGAPEPNGSWTGMVGELINRK
ADLAVAGFTITSEREKVIDFSKPFMTLGISILYRVQLGRKPGYFSFLDPFSLAVWLFMLL
AYLAVSCVLFLAARLSPYEWYNPYPCLRDRRDMLENQYTLGNSLWFPIGGFMQQGSEIMP
RAVSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNIEYGTIHGG
STMTFFMNSRYQTYQRMWNYMNSKQPSVFVKSTEEGIARVVNSKYAFLMESTMNEYYRGL
NCNLTKIGGLLDTKGYGIGMPLGSPFRDELTLAILQLQENNRLEILKRRWWEGGQCLKEE
DHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWSTRHSTEIDEVSVCQEMITEFRNA
VSCKKSSRMRRRRPLSSSAALRHPTRIALGAPRPLRLVREMRLSNGKLYSGTGPLTGGAG
GGGAGGTGLPELGPGPQRLLDDPLGANTTPPPPAPTPVMLSARSCTHVRICQECRRIQSV
RSGSTIGSTTTRIPPLSAPLPRLALPPPPSTSNTDSEGGGGLSPRRLHHSPPHHSSRPIP
SPQNSKTTDLLGKQD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccattaccaatctctccttccctctctgcctttctagcggcaatcctggat
gaccagtctgtttgtgggcgtggggagcggctggcgctggccttggccagggagaacatc
aacagtatgatggagggtccggccagagcccgagtggaggtggacatatacgagctgcaa
aaagactcccagtacgacactactgacaccatgtgtcagattctacccaaaggcgtcgtc
tctgtgataggtcccgcctccagtcccgcctctagctctactgtcagtcacatatgtggg
gaaaaggagatccctcatgtcaagatcggtccggaggagactccccgcttgccatacctg
cgctttgccacagtcactctgtaccctagcaacgaggacctgagcctggccgtagaagcc
atcttgtgctcgttcggttacccatcagccagcctggtctgtgccaaggctgagtgcctg
ctgagattggaggaactggtccgccgctttcttatatctcgggagacgctgtcaatcaga
atgctggatgacaacctggacccgaccccgcttctgaaggagatccgagacgacaaagtg
gccaccatcatcattgacgccaacgcctctgtgtcctatcacatcctcaagaaggcgtct
gagctggggatgacatcatcgttttacaagtacatactcaccacaatggacttcccactc
ctgagactggatgagatagtggacgatcagtcaaacattgtggggttctccatgttcaac
accacccatcccttctatttggagttcatcaggagcctgaacctctcttggagggaggga
tgtgacctaacgtaccccggccctgcgctctcgtcagcattgatgtttgatgcggtgcat
gtggtggtgggggcggtgagggaattgaaccgcagtcaggagattggagtgaagccgctc
agctgctcctcaccccagatctggcaacatgggaccagtcttatgaactacctgcgcatg
gtggagtacgatggtctgacggggcgtgtggagttcaacagcaaaggtcagaggaccaac
tataccctgaggattctggagaaacaccgaggaggcctcaaagagatcggggtctggtac
tccaacaacactctggcaatgaactccaccagtctggatatcaatgtctcagagaagctg
gcaaacaagaccctcactgtcaccaccatactggaaaacccatacgtgatgcgcagagac
aactaccaggtcttccagggcaacgaccagtacgagggcttctgtgtcgacatgctcaag
gagctctcagacatcttaaaattctccttcaagatcaagctggtggatgatggccagtat
ggggccccagagcccaacggctcttggaccggcatggtgggagagctaatcaacaggaaa
gcagacctggccgtagccggcttcaccatcacgtcggagagagagaaagttatcgacttc
tctaagccgttcatgaccctggggatcagcatcttgtacagagttcagctgggtcggaag
ccgggttacttctccttcctcgatcccttctctctggccgtctggctcttcatgctgctc
gcctacctggctgtcagctgtgtgctcttcctggctgcaaggctgagcccttatgagtgg
tacaacccttacccgtgtctgcgagatcgcagggacatgttggagaaccagtacacactc
gggaacagcctgtggttccctattggaggcttcatgcagcaggggtcagagataatgccc
agagccgtgtccaccagatgtgttagcggggtgtggtgggcgttcaccctgatcatcatc
tcctcctacacggctaacctggccgccttcctcaccgtccagaggatggaggttcccatc
gagtctccggatgacttggccgaccagaccaacatcgagtatggcaccatccacggaggg
agcaccatgacctttttcatgaactcgcggtaccagacctaccagcggatgtggaactac
atgaactccaagcagcccagtgtatttgtgaaaagcacagaggagggcatcgcccgcgtg
gtcaactccaagtacgccttcctgatggagagcacaatgaacgagtactaccgcggcctc
aactgtaacctcacgaagataggaggcctactggacaccaagggttatggtatcggcatg
ccgctggggtctccgttcagagatgagctcacgctggccatcctccagctgcaggagaat
aacaggctggagatactgaagaggcggtggtgggagggaggccaatgcctcaaagaggag
gaccaccgtgccaagggtctgggcatggagaacattgggggcatctttgtcgtgctgatc
tgtgggctcatcattgccgtgtttgtggccatcatggagtttgtgtggtccacacgtcac
tctacagagatcgatgaggtgtctgtttgtcaggagatgatcacagagtttagaaacgcc
gtctcctgtaagaagagctcccgtatgcgccgccgtcggcccctcagcagctcagcagcc
ctgcggcatcccactcgtattgctctgggggcccctcgacctctgcgcctggtccgggag
atgcgccttagcaacggcaagctctacagcggcaccggcccgctgacaggtggagctgga
ggaggtggagcaggggggacggggcttcccgaattagggccagggccccagcggctctta
gatgatccactgggggccaacacgacccctcctccaccagcacctacacctgtgatgctg
tccgcccgcagttgcacccacgtgcggatctgccaggagtgccggaggatccagagcgtg
agatcggggagcaccataggatcaaccacaacaagaataccacctttatcagcacccctg
ccccggctagccctacccccacccccatccacatccaacacagacagcgagggcggaggg
gggctcagcccaaggcggctacaccacagcccaccacatcatagctctcgacccattccc
tctccacagaacagcaaaaccacagacctactgggtaaacaggactga
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