Pseudoliparis swirei (Mariana hadal snailfish): 130213285
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Entry
130213285 CDS
T09868
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130213285 (irx4a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130213285 (irx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130213285
NCBI-ProteinID:
XP_056300748
LinkDB
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Position
22:complement(17232678..17240321)
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AA seq
496 aa
AA seq
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MSQPGILQARLRTGTGTSTGTGTGTGAVAGEFFLMTTNSLTTCCESPGRSIADSGVAASG
QTPVYCPVYESRLLATARHELSSAAALGVYGSPYTGSQGYGNYVTYGTDASAFYSLGTFD
TKDPTASAHAGITQATAYYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEH
RKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDENE
DVSQEEQIKSENNEDETTSRPDKDLQLSDLDDFDTLESESSECELKHRYLMNTHMTTTGD
CPAEHLIKDASLKISIPVSLGGEQDLSKSCLKTNQEDFQPDSRQQAKVCYSQQQQQPGHQ
LLDGKPRIWSLAQTATSLNQTEYPSCMLRCQPPPPPPSSLTPSPAATSPVTGLDNRQDSP
VTTLRNWVDGVFHDPLFRHSTLSQALTNTTVSWSTDTKNMAMLEAERNAAVLQQHQDSSK
DNAMSFPKAINKLFCS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacccgggattctccaagcaaggctgcgcaccggcactggcaccagcaccggc
accggcaccggaaccggcgctgtggcgggcgagtttttcctgatgacaaccaactctctg
accacttgctgcgagtccccgggcagatccatagccgactccggagtggcggcgtccggg
cagacaccagtctactgccccgtgtacgagagccggctgctggccaccgcgaggcatgaa
ctcagctcagccgcggcgctgggcgtgtacgggagcccctacaccggcagtcaaggctat
gggaattacgttacatacggcaccgatgcctcggcattctactcgctgggcacattcgac
actaaagatcccacagcttctgcgcatgcgggaataacccaggcaacagcctactatcct
tatgatcctaccttgggacagtaccagtatgacagatatggttccatggatgggggaaca
aggcggaagaacgccacgcgggagacgaccagcacgctaaaagcctggctgcaggaacac
aggaagaacccgtacccgactaaaggagagaagatcatgctcgccatcatcactaaaatg
acgctaacgcaggtctccacctggttcgccaacgccaggcggaggctcaagaaggagaac
aagatgacatggccgcccagaaacaagggctcagaggagaagagatatgacgagaatgaa
gatgtgtctcaggaggagcagataaaaagcgagaacaatgaggatgagaccacaagtcgg
cctgataaagacctacagttgagcgatttggacgatttcgacacgcttgagtccgagagc
tcggagtgcgagctgaagcaccgatacctcatgaacacgcacatgacgacgacgggcgac
tgccccgcggaacacctcatcaaggacgcgtctctgaaaatctccatccccgtttccctg
ggaggggagcaggacttgagcaaaagttgtctcaaaaccaaccaggaggatttccagccg
gacagcagacagcaggcaaaggtgtgttacagccagcagcagcagcagccagggcaccag
ctattagacggcaagcctcggatctggtctttggcacaaactgcgacgtccctgaaccag
acggagtacccgtcctgtatgctgaggtgccagccgccgccgccgcccccctcctccctc
accccatcccccgccgctacctcacctgtcaccggcctggacaacagacaggactcgccg
gtcacgaccctgagaaactgggtggacggagttttccacgaccccttgttcaggcacagc
actttgagccaggcactgaccaacaccaccgtctcttggtccacggacaccaaaaacatg
gccatgctggaggctgagaggaacgcggcggtcttgcagcagcaccaagactcctccaaa
gacaatgccatgagtttcccaaaagctatcaacaaactgttctgctcctaa
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