Pseudoliparis swirei (Mariana hadal snailfish): 130213311
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Entry
130213311 CDS
T09868
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130213311
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
130213311
NCBI-ProteinID:
XP_056300777
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Position
22:11635563..11648527
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AA seq
832 aa
AA seq
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MKSNLERSNGCLPPKKREMLALEQRPMAVATAAPPAAVVTDSLHTENLAWLASVASERCK
SRDAETPRCPISSTSSYCPSTSIPSSTTPLSAVPMASLPAVYPTALHQQAGTIQFAQLGP
NVQFISSGPYAGYISSHIISANAGSALNSSSMAPRPQLDGYTTALISPNTKGEQQFHIGL
SPTELTPVSLPNSPQVTSQYIHLDSRTPLAVSGNTIASPTAHLQLHPHTAVLPQTLTLAP
SQLVVQYADGSVGKKPEGHATGVLNGEFEVVKQTKTPSHHVNHQHVQSYETRHILLPADY
GQHPSGLQTSLVLLAQPNHGAERETGFNKFSFVLTEKGGICLGKPVSRSSSFTSLSSSDL
VKSVAPHTVIQTTLAHEELPASLYSTTQPPIIGYITSANPHAVSYHAALPQHLVIPSGQS
LLIPVSGTNNGTDIEVSRAVSALTATTTPHISTAMPHAYLATALSKCEALGPDGSQPPPA
VAQAPAMPVLSSNPALAMVAAPSPTPAPVPSPAPVSIQASHSISSPSSPVALPPFFMRGS
IIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDSGQSPNAVVIQFSVGELKA
QVCVEVLLEYPFFVFGQGWSSCCPDRTTQLFELSCAKLCVGDVCVSLTLRSLRTTSVPDS
QALGTKLKTGHFSDSCHNVDPPVVKMSPRRNTAGRNSGLMKASSVDRLEREQVTGPGPGL
ELPPGLGLVPGPGEGIYGAGPMLAVSGTVEVRQESVKTDTPALTKIQCGDPERPAARKRR
WSAPERDQTDRAEEEPPLTLPKPSFIPQEVKISIEGHSRIGSGRCLNKRIDC
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaacctggagcgaagtaatggatgtctgcctcctaagaagcgggagatgctt
gctctggagcagaggccaatggccgtagccacagcagcccctccagctgcagtggtgact
gatagtctacacacagagaacctcgcatggctggccagtgtcgccagcgaacgctgcaaa
tccagagacgctgaaaccccaagatgtcccatctcctccacttcctcctactgtccctcc
acctcgatcccttcctcgaccacccctctgtctgcggtgcccatggcttctctccctgca
gtttaccccacagcccttcaccagcaggccgggactatccagtttgctcagctgggaccc
aacgttcagttcatcagctctgggccctacgctggctacatctcctctcacatcatctcc
gccaatgccggctctgcacttaacagctctagcatggcaccgcggccccagctggacggc
tacaccactgccctcatctcccccaacaccaaaggggagcagcagttccacatcggcctc
tcccccacagaactgactcccgtgtcgctccctaactctccccaagtcaccagccagtac
attcatctggacagccgaacgcctctggctgtaagcgggaacaccatcgcttcgcccacg
gcccacctccagctccaccctcacacggccgtcctgcctcaaacgctaaccctggctccc
tcccaacttgtggtacagtatgcagatggttcagttggaaagaaaccagaggggcatgct
acgggtgtgctgaatggggaatttgaggtggtcaaacagactaaaactcccagtcatcat
gtgaatcatcagcatgtccagagctatgagaccagacacatcctcctgcctgcagactac
ggccaacacccttcaggactccagacctccctggtgctgttggcccaacccaaccatgga
gctgaacgggaaactggcttcaataagttctcctttgtcctgactgagaagggaggcatc
tgtttggggaaaccggtgtcgagatcctcctccttcacctccctctcttcctcagatttg
gttaaatcggttgctcctcacacagtcatccagaccactctcgcccacgaggagctgcca
gccagtctgtattccaccacacagccgcccatcattggctacatcaccagtgcaaatccg
cacgctgtcagctaccatgcggcgctgcctcagcacctggttatccccagtggccagtcc
ctcctcattccagtcagcgggaccaataacggcaccgacattgaggtgagtcgtgctgtc
agcgccctgaccgctacgactacccctcatatatccaccgccatgccgcatgcctatctg
gccacagctctgtccaagtgtgaggcgcttgggccagatggaagtcagccaccccctgct
gtcgctcaggcacccgcgatgccagtcctgtcctcaaacccggctctggccatggtggca
gctccctcgccaactcctgctccggtccccagtcccgcccctgtttccatccaagcctcc
cactccatctcctctccctcttcccctgtggcgcttcctccgttcttcatgcgaggatcc
atcatccagctggccgacggggagctgaaacgcgtggaggacctgaagacggaggacttc
attcagagtgctgagattagcagtgagctgaagattgattccagcaccgttgagcggatc
gacagtggacagagtcccaatgccgtggtcatacagttttctgtgggagagctcaaagcc
caggtgtgtgtggaggtgctgctggagtatcccttctttgtgtttggccagggctggtcc
tcctgctgcccggaccggaccacccagctgtttgagctctcctgtgctaagctgtgtgtg
ggtgacgtgtgcgtgtcgctgaccctccgcagcttgaggaccacttcagtaccagacagc
caggctttggggaccaagctgaagaccggtcacttctctgactcttgtcacaatgtggat
ccccccgtcgtgaaaatgagtcccagacgaaacaccgcgggcagaaatagcggcctcatg
aaggcttccagtgtagacaggctggagagggagcaggttactggaccaggaccaggacta
gagctaccaccgggactgggactagttccaggaccaggggaggggatctatggagctgga
ccaatgctcgcagtctctgggactgtagaagtgagacaggaatcagtgaaaacagacacg
cctgctcttaccaaaatacaatgcggtgatccagagagaccggcagcccgcaagagacgc
tggtcagctccagagcgcgaccagactgaccgagcggaggaggagcctcctctgactctg
cccaaaccttccttcatccctcaggaggttaaaatcagcatagagggccactccaggatt
gggagtggaaggtgcttgaataaaagaatagactgttga
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