Pseudoliparis swirei (Mariana hadal snailfish): 130213336
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Entry
130213336 CDS
T09868
Symbol
si:dkey-79d12.5
Name
(RefSeq) maternal B9.15 protein
KO
K14443
protein Tob/BTG
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130213336 (si:dkey-79d12.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130213336 (si:dkey-79d12.5)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130213336 (si:dkey-79d12.5)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130213336 (si:dkey-79d12.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
RA
Motif
Other DBs
NCBI-GeneID:
130213336
NCBI-ProteinID:
XP_056300837
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All DBs
Position
22:10147584..10153783
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AA seq
283 aa
AA seq
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MKREVAAGVNFLKSLAVARGKLSEAKAELFAEKLQKLLCNKYDDHWYPGCPSKGQAYRCI
RVNNRAVCDEVILKACEQSDLTPSELGFPREITLWIDPLEVCARSAENGPPFTVACFEEE
GVEGKPSDSSADLVNLDTSDYHSGTSSDCSSTASSDTEEEAKDGETEGGQKKEEKEVVKK
DAAESNAYAIAMVPRIRKRREKGPNKIKYVRQMVPASLQYFYHPAPVWPQYQKAAPVFLN
AVCAPPLHPPLPQQVFSYYIVQQQSPQFILPQAALQPWGAVKG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagaggtggcggctggagtgaacttcctcaaaagcctggctgtggcacgtggc
aagctcagtgaagccaaagcagaactgtttgccgagaagctacagaaacttctatgcaac
aaatatgatgaccactggtaccctggctgccccagcaaaggccaggcatacagatgtatc
cgggtaaataacagagccgtctgtgatgaagtgatcctgaaggcatgcgagcagagtgat
ctcacacccagtgaactaggctttccgcgtgagatcacactgtggatcgaccctctggag
gtgtgtgccagatctgcagagaacggcccgccattcacagttgcctgtttcgaagaggaa
ggcgtggagggaaaaccgtccgactcttcggcggacctggtaaatctggacacgtcagat
taccactctggtacttcttcggattgtagttccactgcgtcgagcgacacggaggaggag
gctaaagatggcgagacggaaggagggcaaaaaaaagaagagaaggaggtcgtcaagaag
gatgcagcggaaagcaacgcctacgcgatagcaatggttcccaggattcgtaagcggcgc
gagaaaggaccgaataagattaaatacgtcagacagatggtccctgccagcctccagtac
ttctaccaccctgcaccagtgtggcctcagtaccagaaggccgctcctgtgtttctcaat
gcagtgtgcgcacctccgctgcatcctcctctgccccagcaggtatttagctactacatt
gtgcagcagcaatctcctcagttcattctgcctcaggccgctctgcagccgtggggagct
gtgaagggatag
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