Pseudoliparis swirei (Mariana hadal snailfish): 130213395
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Entry
130213395 CDS
T09868
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130213395 (tmc4)
03037 Cilium and associated proteins [BR:
pswi03037
]
130213395 (tmc4)
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130213395 (tmc4)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130213395 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
130213395
NCBI-ProteinID:
XP_056300962
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All DBs
Position
22:complement(13891798..13900411)
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AA seq
700 aa
AA seq
DB search
MSSEPQPPGSRQAYDDIEENGYPSDQQSLRLQRVSSRVSNQNYPQHDWSSTPAEEDDGGS
SGPPRDLKAIPLPMSLKRAVRQVQQMQVPVVSSRQSWRRKRNKSLQKLKQNARGLLDFFT
LWRKSLQKIGGNFGGGVQSYFLFLRFLVVLNFVSFLLIAGFVLIPSIVFRSVGTSLVNST
GADKCMVYDPNPQGLVVFYNYFLHLLSGTGFMEYSYLFYGYYNNTKVEDSDFSYNIPLAY
LFTAVFYFFFCLICLIARMGTAARVAVATGGSAVGNYSIIVFTGWDYGCQGDRATKLKQK
NVHYRLQVDLEEEIRKKKTAALTLCQKIVLYSLRVIMFFVSSGLIAAAFYGIFMATNFSQ
SKSGEEGILGLILEYLPSIAITIGNFVVPLLCDQFALIERYTPSTTVIVALLRAVFLRLM
SLAILLFTLWRQITCEGNSEGERCKLCQYNYEDYPCWETRMGQEMYKLTLFDFIINIAVL
VLVEFPRRMVVDNWPSKLAQWVGRQEFVVSANVLGLVYGQTVVWTGALFCPLLPLINTIN
FILLFYFKKITLFSNCRPALKTFRSTTSTFFFLVVLLFGWGLATVVMVYSLAEIRPSMGC
GPFRFFPNMWSIVPTSFESLSKIPQDFLFFIGSQSFSIPLFVLFCVVMWYFIALASVYGK
TVALLRAQLKLEGRDKQFLVKQIENLSRIQILKHTAAAHE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgagcctcagccaccgggctccagacaggcgtatgacgacattgaagagaac
ggttacccgagtgaccagcagtccctgaggttacaacgggtttcatctcgagtgtccaat
caaaactatcctcagcacgactggagctcgacccctgcagaggaggatgacgggggcagc
agtggacctcctcgggacctcaaggccatcccgctgcccatgtccctgaagagagctgtg
aggcaggtgcagcagatgcaggtgcctgtggtttccagcaggcagtcctggagacggaaa
agaaacaaatctctgcagaaactaaaacagaacgccagaggattgctcgacttttttaca
ctgtggagaaagtctttgcaaaagattggagggaacttcggaggtggcgtccagtcttac
ttcctgttcctgcggttcttggtggtgctcaattttgtttcctttttactgattgctggg
ttcgtcctcatccccagcattgtcttcagatctgttgggaccagccttgttaacagcact
ggtgcagataagtgcatggtttatgaccccaatcctcaaggcttggtcgtgttctataat
tacttcctgcacttactttcgggaacgggtttcatggagtattcatacctgttttacggc
tactacaacaacacaaaggtggaggacagcgacttctcctacaacatccccctggcctac
ctcttcactgccgtcttctactttttcttttgtctcatttgtctcattgcacggatgggg
actgcagctcgagttgccgtggcaacgggaggcagcgctgtgggcaactacagcattata
gtgttcaccggctgggactacggttgccagggagatcgagctaccaaactgaagcagaag
aacgtccactaccggctgcaggtggatctggaagaggagataagaaagaagaagacagcc
gctctaactttgtgtcaaaaaatagttttatactctctacgtgttattatgttttttgtt
tcatctgggctcatcgcagcagctttctacggcatcttcatggccaccaacttcagccag
agtaagagtggtgaggaagggatcttgggtctgattttagagtacctgccttccattgcc
atcaccattggaaacttcgtggtgccgctgctgtgtgaccagttcgccctgattgagcga
tacacccccagcaccactgtcatcgtggcgctcttaagggcagtgttcctccgtctcatg
agtctggctatccttctcttcaccctgtggcgtcagatcacctgtgaagggaactcagag
ggtgaacgctgtaaactgtgccaatacaactatgaagactacccgtgctgggaaacgcgt
atggggcaggagatgtacaaactcacgctgttcgacttcatcatcaacatcgccgtgctc
gtcctggtggagtttccacgcaggatggtggtggacaactggcccagtaagctggctcag
tgggtgggtcgacaggagtttgtcgtttccgccaacgtgcttggactggtttatggtcag
actgtcgtttggaccggagctcttttttgccctctgctgccgctcatcaacaccatcaat
ttcatcctcctcttctacttcaagaagatcacactcttctctaattgtcggccagcactg
aagacgtttcgctccaccacctccaccttctttttcctggtggtgctcctgtttggctgg
ggcttggccacagttgtcatggtttacagtcttgctgagatccgtccttctatgggttgt
ggccctttccgtttcttccccaacatgtggtcgattgttccgacatctttcgaaagcctc
tctaaaattccacaggactttctcttcttcatcggttcccagtcgttctccatccccctg
tttgtgttattttgtgtggtgatgtggtatttcatagccttggcatctgtttatgggaaa
accgttgccctgctaagagcgcagcttaaactggagggccgcgacaagcagttcttggtg
aagcagattgagaatctgagtcgaattcagatactaaaacacactgcagcagcacatgag
tga
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