Pseudoliparis swirei (Mariana hadal snailfish): 130213428
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Entry
130213428 CDS
T09868
Symbol
ddr1
Name
(RefSeq) epithelial discoidin domain-containing receptor 1 isoform X1
KO
K05124
discoidin domain receptor family member 1 [EC:
2.7.10.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130213428 (ddr1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130213428 (ddr1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130213428 (ddr1)
Protein kinases [BR:
pswi01001
]
Receptor tyrosine kinases (RTK)
DDR family
130213428 (ddr1)
CD molecules [BR:
pswi04090
]
Proteins
130213428 (ddr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
DDR1-2_DS-like
Pkinase
F5_F8_type_C
F5_F8_type_C_2
Mid2
Motif
Other DBs
NCBI-GeneID:
130213428
NCBI-ProteinID:
XP_056301027
LinkDB
All DBs
Position
22:15158639..15197440
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AA seq
968 aa
AA seq
DB search
MALPTLRLFPVTVVTVLVALVSSSGDNEWDFNPAQCRYALGMEDGAIPDSDITASSAWSD
STEAKHGRLSTGEGDGAWCPAGAVFPSGSEYLQVDLHKLHFLALVGTQGRHADGHGQEFA
RSYRLRYSRDGVKWITWKDRWGKAAVSGNENTYDVVLKDLGPPIVARMVRFYPLADRVMS
VCLRVELYGCLWNDGLTAYTVPVGHVMHLSGISGMPVYLNDTTYDGSTEQGLQFGGLGQL
CDGVLGGDDFIQTKELRVWPGYDYLGWSREALGYGSVDIEFHFEKPRVFHYMQVHSNNRH
TQGVRVFSKVECLFKPGLLQPWSTELTLPVPLEDLKDPSSRPITLPLGGRPAQILRCKFY
FADSWLLISEISFLSEPFEEDATEKDSFLPNPPKITTTSSSPSLVNLTSSSPTSNHSSPN
TTAGPSDAEFGAITPRAGLPVAKDDSSNTAILIGCLVGIILLLLAVIAVILWRQYWKKIL
GKAQGSLSSDELRVHLSVPLDNVVINNTHSYSSRYQRIHTFPDDRDHDREGEGEYQEPSA
LLRPRDPRDGTDHRKGSRPLVVPRAAQEKSLNVPQACGLDMEKGFPTTQEEPPPYPGSPP
YPSLSPPVSPPMPPSVPHYAEADIVSLQGVSGNNTYAVPALASSSPGADGAPLPELPRQC
LIFKEKLGEGQFGEVHLCEIENPQDLPNLEFPFNVRKGRPLLVAVKILRPDASKNARNDF
LKEVKILSRLKDPNIIRLLGVCVSSDPLCMVTEYMECGDLNQYLSHRVLLDKTGLSHNTP
TISYPALIAMASQIASGMKFLASLNFVHRDLATRNCLVGGERGESGEDQGGERHIKIADF
GMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDMWAFGVTLWEMLSVCQEQPY
SNLTDEQVIDNAGEFFRDQSRQVYLSRPAVCPQGLYELMLSCWNRDCKLRPAFADIHSFL
TEDAMNMV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggccttgccaaccctgcggctgtttcctgtcaccgtggtcacggtcctggtggcgctg
gtgtcgtcttctggggacaatgagtgggactttaacccagctcagtgtcggtacgccctc
gggatggaggatggcgccatcccagactctgacatcactgcctccagcgcctggtcggac
tcgactgaggccaaacatggaaggttgagcaccggagagggggatggggcgtggtgtcct
gcaggagccgtgttccccagtggatcagaataccttcaggtggacctgcacaaactccac
ttcctagctctggttggtactcagggtcgtcacgccgacgggcacggccaggagtttgcc
cgcagttatcggctccgctattcccgagacggagtgaaatggatcacctggaaggaccgc
tggggaaaagcggcggtgtcggggaacgagaacacctatgatgtggttctgaaagacctg
ggcccccccatcgtggcccgcatggtgcgcttctacccactggctgaccgagttatgagc
gtttgtctccgggtggagctctacggttgtctttggaatgatgggttgacggcttacacg
gttccagtgggtcacgtcatgcatctgtctggcatatctggcatgcccgtctatctgaac
gacaccacctacgacgggagcaccgagcaagggctgcagtttggcggcctgggtcagctg
tgtgacggcgtcctaggaggagacgacttcatacaaaccaaagagctgagggtgtggccg
gggtacgactacctgggctggagccgggaagccctcgggtacggcagcgtggatattgag
ttccactttgagaagccacgtgtcttccactacatgcaggtgcacagtaacaaccgccac
actcagggcgtgcgagtcttcagcaaggtcgagtgtcttttcaagccgggcctcctccag
ccttggtccacggagctcactctgcccgtgccccttgaggatctgaaagacccctcctcg
cgacccatcaccctcccgctgggcggccggccggctcagatcctccgctgcaaattctac
tttgccgacagctggctcctcatcagcgagatatccttcctctcggagccgtttgaggag
gatgcaacagagaaggattcatttcttcccaatcctcccaagatcacgaccaccagttcc
tctccttctcttgtcaacctcacttcttcctctcccacgtccaaccacagctcccccaac
accactgccggcccctcagatgccgaatttggtgccatcacaccaagggcggggcttcct
gtagccaaggatgacagcagtaatacggctattctgattggctgcctggtgggcatcatc
cttttgctgctggctgtgatagctgtcattctgtggaggcagtactggaagaagatactg
ggcaaggcccaggggagcctctccagtgacgagctgcgggttcacctgtcggtccccttg
gacaacgtggtcatcaacaacacacacagctactccagccgctaccagcgcatccacact
ttccccgacgaccgcgaccatgacagagagggagagggagagtatcaagagcccagcgct
ctgctgcggccgagggaccccagagacggcacagatcacagaaaaggctcgagaccccta
gtcgtcccccgcgccgcgcaggaaaagagcctcaatgtgccgcaggcctgtgggttggac
atggagaagggtttccccaccacccaagaggagcctcctccctaccccggctctcctccg
tacccctccctgtctccccccgtttctcccccaatgcctcccagcgtccctcattacgcc
gaggcggacatcgtgagcctgcagggggtcagcggtaacaacacctacgccgtgcccgcc
ttggcctcctcgagccccggagccgacggcgccccgctgccggagctgccgcgccaatgc
ctcatcttcaaggagaagctgggagagggacagtttggagaggttcacctgtgtgaaatc
gagaaccctcaggaccttcccaacttggagttccccttcaatgtgaggaaaggtcgccct
cttctggtcgccgtgaagatcctccgcccggacgcctccaagaatgccaggaacgacttc
ctgaaagaggtgaagatcctgtctcggctgaaggacccgaacatcatccgcctgctgggc
gtgtgtgtgagcagcgaccccctctgcatggtcaccgagtacatggagtgtggagacttg
aaccagtatctgtcccatcgggtgcttctggacaagacgggactttcacacaacaccccg
accatcagttacccggccctcatcgccatggccagccagatcgcgtcaggcatgaagttc
ctcgcctcgctcaactttgtgcaccgggacctggccacgcgtaactgtctggtcgggggc
gagcggggggagagcggagaggatcagggcggcgagcgtcacatcaagatagccgacttt
ggcatgagcaggaacctttacgcaggagactactaccggatccagggcagggcggtgctg
cccatacgctggatggcctgggagtgtatcctcatgggtaagttcaccacggccagcgac
atgtgggcgttcggggtcacgctgtgggagatgctgagcgtgtgtcaggagcagccgtac
tccaacctcaccgacgaacaagtcatcgacaacgccggggagttcttcagagaccagagc
cgacaggtgtacctgagcaggccggcggtgtgtcctcagggtctctacgagctcatgttg
agctgctggaaccgagactgcaagctccgccccgccttcgccgacatccactcctttctg
accgaggacgccatgaacatggtgtag
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