Pseudoliparis swirei (Mariana hadal snailfish): 130213434
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Entry
130213434 CDS
T09868
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130213434 (nop2)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
130213434 (nop2)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130213434 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
130213434
NCBI-ProteinID:
XP_056301040
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Position
22:14697248..14702644
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AA seq
740 aa
AA seq
DB search
MGRKLDPTNKVKRGPGRKSKKQQGAETELAKFITDEEATAPKRLSSRGRKRAAKRVQKKK
PKDAVEEEPKKGFTDENSQWLKPAKRKRESDEPESDDDSDEHWEQDDEEEEDEQQEQTKK
AAKDQGKKCAKLGIKEEEDDDDDDEMVDDYGAVEDSSGDEAAAEEDSDGEELLPIERAAK
KEKKMKETAAQESDDDDDEEEEDGGDKENKSDADSDEEDTVQANMDEMDAFRLPDAEESE
KESILPLDLKTIYERIKDNVDVLCNFSKKREVGKARSEYISLLKKDLCMYYSYNNFLIEK
LMDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLV
IYDSSVPVGATPEYLSGQYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTYIAQLMR
NTGMIVANDANADRLKSVVGNVHRLGVTNTVICNCDGRQFPKVMSGFDRVLLDAPCSGTG
VIAKDPGVKTSKDEADIQRSAHLQKELILSAIDSVNAESASGGYLVYCTCSIMVEENEWV
VDYALKKRNVKLVPIGLDFGKEGFTRFKKHRFHPTLRLTRRFYPHSHNMDGFFVAKFKKF
SNVVPTATAGKDDADAPEATEEIPSKSDKKKKTVPGKGGDLKGKPQANGTAAKKPANIKK
KGKKDSPAGPKKAKIAKMAGETVQGAETKKPAAKTADDTKASTAGKKKGKKPKAAVKANG
RMGKNKFKKLMYMLKKTGGE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaggtgaagagagggccagggagaaaatccaaa
aagcagcaaggagcagagactgagttggccaagtttataactgatgaggaagcgacagca
ccaaaacgcctgtcaagtcgaggcaggaagagagctgcaaaaagagtccagaaaaaaaag
ccgaaagatgctgttgaggaagagcccaagaaaggtttcactgatgagaacagtcaatgg
ctgaaaccggcaaagaggaagagagaaagtgatgaacctgaaagtgatgatgacagtgat
gagcactgggagcaggacgacgaggaggaggaggacgagcagcaggaacagacaaagaag
gcagcaaaggaccaaggaaagaagtgtgccaaactaggaattaaagaagaggaggatgac
gacgatgatgatgaaatggttgacgactacggtgcagttgaagacagcagtggtgatgaa
gcagcagcggaggaagacagtgatggagaagaacttcttcccattgagcgtgcagctaag
aaagagaaaaagatgaaggaaaccgcggctcaagagagtgatgatgatgacgatgaggag
gaggaagatggtggtgataaggaaaataagtcagatgctgactctgatgaggaagataca
gtacaagccaacatggatgaaatggatgccttcaggctacctgatgcagaggaatctgag
aaagaaagtatcctccccctggacctgaagacaatctatgaaagaattaaggacaacgtt
gatgtcctttgtaatttttcaaaaaaaagggaagtagggaaagcacgctcggagtacatt
tctcttctgaagaaggatctctgcatgtattacagctacaacaactttctcattgagaaa
ttaatggacctcttccctctctcagagctggttgatttccttgaggccaatgaaatccag
agaccggtcactattcggaccaacacactgaaaacaagaaggagggatcttgcccaggct
ctgatcaacagaggcgtgaaccttgatcctcttgggaaatggtctaaagttggtttggtc
atctatgactcctcagtacctgttggtgcaaccccagagtatctgtctggtcagtacatg
ctgcaaggagcctccagttttctgcccgtcatggcgctttctccacaagagggagagttg
gtgttggacatgagctcagctccaggaggcaagaccacctatattgctcagctgatgaga
aacaccgggatgatcgtggctaatgacgccaacgctgacagactgaagagtgttgtgggc
aacgtccaccgcctgggggtcaccaacaccgtgatctgcaactgtgatggaaggcagttc
ccaaaggtgatgagtgggtttgacagagtgctgcttgatgcgccgtgctcaggcacagga
gtcatcgctaaagatccaggtgtgaagaccagcaaggacgaggccgacatccagcgatct
gctcacttgcagaaagaactgattctgtctgccattgactctgtcaatgccgagtctgct
tcagggggatatctggtctactgcacgtgttcaataatggtggaggagaacgagtgggtg
gtagactacgctttaaagaaaagaaatgtcaaattagttcccattggactagactttggc
aaggaaggcttcaccaggttcaaaaaacatagattccatcctactctgcgactgactcga
cgattttaccctcattcccacaacatggatggattttttgtggccaagttcaagaaattc
tccaatgtagttccaactgcgacggcaggaaaagacgatgcagatgctcctgaggcgact
gaagagataccatccaagagtgacaagaaaaagaagactgttcccggcaagggaggcgac
ttaaagggaaaaccccaagccaatggaacagcagccaagaaacccgcaaacatcaagaaa
aagggcaaaaaggactcacctgctggaccaaaaaaggcaaagattgccaagatggctgga
gagactgtgcaaggagcagagaccaagaagcctgcggcgaagacagctgacgacacgaaa
gcatcaacggctggaaaaaagaaaggcaaaaagcccaaagcagccgtgaaggcaaatggc
agaatgggaaagaataaattcaaaaagttgatgtacatgttgaagaaaacaggcggagaa
tga
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