Pseudoliparis swirei (Mariana hadal snailfish): 130213436
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Entry
130213436 CDS
T09868
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130213436 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130213436 (pex5)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130213436 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_14
TPR_17
TPR_8
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_20
TPR_Slam
ANAPC3
TPR_9
TPR_10
PEX18_PEX21_C
ComA
Motif
Other DBs
NCBI-GeneID:
130213436
NCBI-ProteinID:
XP_056301043
LinkDB
All DBs
Position
22:15016060..15026852
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AA seq
680 aa
AA seq
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MAMRELVEAECGGANPLMKLTGHMTKEGGAWRHRSTPTIAPSPIEIATEEELVNEFLQAP
PRPPHTFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWTGEFLSGPDSASAPGII
ALGDAADADWTKEFIAEAADPGRWAEEYLEQSEEKLWLGDLGDQEKEWTTEYQAGEELKQ
TANELVSKVDDPKLQNTEFLRFIRQIGEGSVTVESKTDKRLKDKAQAQEAQNWASNLNQF
LTETGGGSLALEAPERSKKIEKVKAKQAEQWAKVIRQVSQDSAEAWVDEFATSGPDFQHT
KAAVESDVDFWEKLQQEWEEMAKRDAESHPWLSDFDQLLSTSYDKGYQFEEDNPYLSNPD
PLSEGVKRIEAGDIPGAVRLFESAVQKEPDNQLAWQYLGSCQAENEQEFAAISALRRCIE
LKKENLTALMALAVSFTNESLHRQACETLRDWLKHNPKYHSVWEQNEGEHRQEGAGQREK
ERERFGSLLPESLFSDVQSLFLQAANSDPAQVDPQLQCGLGVLFNLSGEYDKAVDCFSAA
LSVTPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQPGFIRSRYNLGISCVNLGAHRE
AVEHFLEALSLQRQASGDGARAARGPGGAAATMMSDNIWSTLRMALSMMGESPLYAAADH
RDLDTLLAHFSQREVDGGTE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagttggtggaggcagaatgtgggggagccaatcccctcatgaagttg
accggtcacatgaccaaggaagggggggcatggcggcaccgctcgacacctacaattgcc
ccgtctcccattgaaattgcaactgaagaagagttggtgaatgagttccttcaggcgccc
ccccgacccccacacacatttgacatgggtcagctgttggaggaaatgcagcagattgac
cagcagagctacagacaagctccacagagagctccagatgtggcagcgttggccctctct
ggtgattggactggcgagttcctctccggtcctgactctgcctccgctccggggatcatc
gctctcggtgatgcagcagatgctgattggacgaaagaatttattgctgaggcggcagat
cctggacgctgggcggaggagtatctggaacagtcagaggagaagttgtggctgggtgac
ctgggagaccaggagaaggaatggacaacagagtaccaagcaggggaggagctgaagcag
acagccaatgagctggtctcaaaagttgatgaccccaagttgcaaaacactgagttcctg
cgattcattaggcagattggcgagggcagtgtgacagtggagagcaagacagacaaacgg
ctcaaagataaagctcaggcccaggaggctcagaactgggcctccaacctcaaccagttc
ctgacagagacggggggagggagtcttgccctggaagccccagagaggagtaagaagatt
gagaaagttaaagctaaacaagcagagcagtgggccaaggtcatcaggcaggtgtcgcag
gactcggctgaagcctgggtggatgagtttgccacgtcaggaccggatttccaacatact
aaagctgcagtggagagtgatgtggatttctgggagaagttgcagcaggagtgggaggag
atggctaagagggacgcagagagccacccctggctgtctgacttcgaccagctactcagc
acttcttatgacaaggggtatcagtttgaagaggacaacccctatttatccaaccctgac
cctttgtcagagggagtgaagaggatagaggcgggggacattcctggtgctgtgcgctta
tttgaaagtgctgtccagaaagaaccagataaccagctggcgtggcaatatctgggatcc
tgtcaggcagagaatgagcaggaatttgccgccatcagcgccctccgcagatgtatagag
ctgaagaaagaaaacctgacggctctgatggcgttggctgtcagtttcactaacgaatcg
ctgcacaggcaggcctgtgagactcttcgtgattggctaaagcacaaccctaaataccac
tccgtgtgggagcagaatgagggtgaacaccggcaggaaggtgccggacaaagggagaaa
gagagggagcgcttcggctcactgctgccagagtctttgttttctgatgttcagtccctc
ttcctgcaagcggccaactctgaccccgcccaggtggacccccagctgcagtgtggcctg
ggagttctcttcaacctcagcggggagtacgacaaggcggtggactgtttcagcgccgct
ctgtccgtcacaccacaggactacctgctgtggaataagttgggggccacactcgccaac
ggcagccgctcagaggaggctgtggccgcctacaggagagctctggagctgcagcccggt
ttcatacgcagccgctacaacttgggaatcagctgcgtgaacttaggggcacacagagag
gcggtggaacacttccttgaagctctctctctacagcggcaggcctccggggacggagcg
agagcggccaggggaccgggaggtgccgcggccaccatgatgtctgacaacatctggtcc
accttgcgcatggctctcagcatgatgggagagagcccgctgtacgctgcagcagaccat
cgggacttggacacgttgctggctcacttctcccagagagaggtggacggtgggacagaa
tga
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