Pseudoliparis swirei (Mariana hadal snailfish): 130213516
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Entry
130213516 CDS
T09868
Symbol
hoxa11b
Name
(RefSeq) homeobox protein Hox-A11b
KO
K21951
homeobox protein Hox-A11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130213516 (hoxa11b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130213516 (hoxa11b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130213516
NCBI-ProteinID:
XP_056301190
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Position
22:complement(10739936..10744925)
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AA seq
276 aa
AA seq
DB search
MDFDERISGSNMYLPSCTYYVSGADFPGLPHYLTQNQSSCPMTYPYPSSALPQVPSVREV
AFRDYGIDTSSKWHHSRGSLSHCYPEDIVHRDGWTSPSARGAEILVKGSSGGSRCANPTP
GFYGSVGRNGVLPQAFDQFFDTAYGSAESRATQTAHAADSDRHAAKTSPAPAHPGSDMAE
SCSPKSSSSHSEEKQSKSSNGQRTRKKRCPYSKYQIRELEREFFFSVYINKEKRMQLSRM
LNLTDRQVKIWFQNRRMKEKKLNRDRLQYYITTPLL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagcggatttctggctcgaatatgtatttaccgagctgcacttactac
gtctccggagcagacttcccaggtctcccacattatttaacccagaaccagtcctcttgc
cccatgacatacccatacccgtcctcagccctgccacaggtcccgtccgtgagagaagtg
gctttcagagactatgggattgatacgtccagtaaatggcaccacagcagggggagcctg
tcacactgctacccggaggacatcgtgcacagggacggctggacgagcccgagcgcacgg
ggggcagagatcctggtaaaaggcagctccggcgggagtcgctgcgccaacccgactccc
ggcttctatggcagcgttggcaggaacggggtcctgccacaggccttcgaccagttcttc
gacaccgcctacgggagcgcggagagccgcgcaacgcagaccgcgcacgcggcagactcg
gacagacacgccgccaaaacaagtcccgctccggctcatccgggctcggacatggcggag
agctgcagccccaagtcgtcctccagccacagcgaggagaaacagagcaaaagcagcaat
ggccagaggacgcgcaaaaagagatgtccatattcaaagtatcagatcagagaactcgag
agggaattctttttcagcgtttacatcaacaaagagaagcgcatgcagctctcccggatg
ctcaatctgacagatcgccaagtcaaaatctggtttcagaacaggaggatgaaggagaag
aaactgaacagagaccgtttacagtactacatcacgacgcccctgctataa
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