Pseudomonas sp. W03: SD196_00250
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Entry
SD196_00250 CDS
T11012
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswo03000
]
SD196_00250
Transcription factors [BR:
pswo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SD196_00250
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_20
HTH_11
Motif
Other DBs
NCBI-ProteinID:
XOT22681
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Position
53961..54851
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AA seq
296 aa
AA seq
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MSRDLPPLNALRAFEAAARLRGVSPAADELSVTHGAVSRQIRQLEEDLGVTLFVKDGRGV
KLTDAGQRLSEVASDSFERLRSVCSELRRQADGNAPFVLGCPGSLLARWFIPRLDRLNRD
LPGLRLQLSASEGEIDPRRAGLDATLHFAEPPWPADMQVHELAVERVGPVLSPRYSRFAE
LCAAPATALMDESLLYTTSRPQAWPAWATNSGLDAGALRLGQGFEHLYYLLEAAVAGLGV
AIAPQQVVADDLAAGRLAAPWGFVETRARLALWVPARLPDRRAVLLADWLRGELKV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagaccttcccccgctcaatgccctgcgcgccttcgaggccgcggcgcgtctg
cgcggcgtgagcccagcggcggacgagctcagcgtcacccacggcgcggtgagccggcag
atccgtcagttggaggaggacctgggcgtcaccctgttcgtcaaggacgggcgcggcgta
aaactcaccgatgccggccagcgcctgagcgaagtcgccagcgattccttcgaacgcctg
cgcagcgtctgctccgagctgcgccgccaggccgacggcaacgcgcccttcgtgctcggc
tgtccgggcagcctgctcgcccgctggttcatcccgcgtctggaccggctgaaccgcgac
ctgcccggcctgcgcctgcaactgtcggccagcgagggcgagatcgacccgcgccgcgcc
ggtctcgatgccaccctgcacttcgccgagccgccgtggccggcggacatgcaggtgcac
gaactggcggtggagcgcgtcggtccggtgctcagcccgcgttactcgcgcttcgccgaa
ctctgcgcggcgccggccaccgcgctgatggacgagtctctgctgtacaccacctcgcgc
ccgcaggcctggccggcgtgggcgaccaacagtggcctggacgccggcgccttgcgcctc
gggcagggtttcgaacacctctactacctgctggaagcggcggtggccggcctgggcgtg
gccatcgcgccgcagcaggtggtggccgacgatctcgccgccggtcgcctggctgcgccc
tggggcttcgtcgaaacccgcgcgcggctggcgctctgggtgcccgcgcggctacccgac
cggcgcgcggtgctgctggcggactggctgcgcggcgaactgaaagtctga
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