Pseudomonas sp. W03: SD196_02820
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Entry
SD196_02820 CDS
T11012
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02020
Two-component system
pswo02024
Quorum sensing
pswo02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_02820 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_02820 (crp)
02025 Biofilm formation - Pseudomonas aeruginosa
SD196_02820 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswo03000
]
SD196_02820 (crp)
Transcription factors [BR:
pswo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SD196_02820 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
MarR
HVO_A0261_N
MarR_2
MltA
HTH_28
HTH_11
GntR
bAvd
HTH_24
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
XOT23169
LinkDB
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Position
complement(611438..612085)
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AA seq
215 aa
AA seq
DB search
MVAITLTPKIKNLDKLLAHCHRRRFTAKSTIIYAGDRCESLFFIIKGSVTVLIEDDDGRE
MIIGYLNTGDFFGEMGLFEKEGSSNQERSAWVRAKTECEVAEISYTKFRELSQQDPEILF
TLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGR
IVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtagctattacccttacacccaaaatcaagaacctcgacaagttgctcgcgcactgc
caccgccgccgcttcaccgccaagagcaccatcatctacgccggcgaccgctgcgagagc
ctgttcttcatcatcaagggctcggtgaccgtactgatcgaggacgatgatggccgcgag
atgatcatcggctatctcaataccggcgacttcttcggagagatggggctcttcgagaag
gaaggcagcagcaaccaggagcgcagcgcctgggtccgcgccaagaccgaatgcgaagtt
gccgagatcagctacaccaagttccgcgaactgagccagcaggatccggagattctcttc
actctcggcagccagatggccgatcgcctgcgcaagaccacccgcaaggtcggcgacctg
gccttcctcgacgtgaccggccgtgtcgcccgcaccctgctggacctgtgccagcagcca
gacgccatgacccacccggacgggatgcagatcaagatcacccgccaggagatcggccgc
atcgtcggctgctcccgcgaaatggtcggccgcgtgctcaagagcctggaagaacagggt
ctggtgcacgtgaagggcaagaccatggtggtcttcggcacccgctga
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