Pseudomonas sp. W03: SD196_03175
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Entry
SD196_03175 CDS
T11012
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pswo Pseudomonas sp. W03
Pathway
pswo03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
pswo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD196_03175 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SD196_03175 (uvrA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XOT23230
LinkDB
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Position
complement(670080..672914)
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC
PDHDIPLEAQTVSQMVDQVLALPEGRKLMLLAPVIRERKGEHLAVFEEMRAQGFVRARVN
GKLYELDELPKLDKKLKHSIDVVVDRFKVRGDLQQRLAESFETAINLADGIALVAPMDDE
EGEEIIFSARFACPICGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDARRVVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAGHFGFSLEEPFQDLDPEHQKFILNGSGRENVEFRYL
NDRGDIVKRAHPFEGILPNLERRYRETESATVREELAKFLSTQPCPDCHGTRLRREARHV
WVGDKTLPAITSMPVGTACEYAESLTLTGRRGEIASKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLTHLRNLGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGTPQEVMDHPDSVTGKYLSGRTKILVP
AERTPRNKKQLLKLKGARGNNLQNVNLEIPVGLFTCVTGVSGSGKSTLINNTLFPITATA
LNGATSLEVAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPEA
RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVRYK
GKSITEVLDMTIEDAREFFDAVPAIARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEQVADMEASHTGRFLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagatcctcatccgtggggcacgtacccacaacctgaagaacatcgacctgact
ctgccccgcgacaagctgatcgtgatcactggcctgtccggctccggcaagtcttccctg
gccttcgacacgctctatgccgagggccagcgccgctacgtggaatccctgtcggcctat
gcccggcagttcctctcgatgatggaaaagcctgacgtcgacaccatcgaaggtctgtcg
ccggccatttccatcgagcagaaatccacttcgcacaacccgcgctccaccgtgggcacc
atcaccgagatctacgactacctgcgcctgctctatgcgcgcgtcggtattccgcgctgc
ccggaccacgacatcccgctggaggcgcagaccgtcagccagatggtcgaccaggtgctg
gcgctgcccgaaggccgcaagctgatgctgctggccccggtgatccgtgagcgcaagggc
gagcacctggcggtgttcgaggaaatgcgcgcccagggcttcgtccgcgcccgcgtcaac
ggcaagctctacgagctggacgagctgcccaagctggacaagaagctcaagcactccatc
gacgtggtggtggaccgcttcaaggtgcgcggcgacctgcagcagcgcctggcggaatcc
ttcgagacggcgatcaacctggccgacggcatcgccctggttgcgcccatggatgatgaa
gaaggtgaggaaatcatcttctccgcccgcttcgcctgcccgatctgcggccactcgatc
agcgagctggaacccaagctgttctccttcaacaacccggccggcgcctgcccgacctgc
gacggcctaggcgtgaagcagttcttcgacgcgcgccgggtagtcaatggcgaactgacc
ctggccgaaggcgcgatccgcggctgggaccggcgcaacgtctactacttccagatgctc
ggctccctggccgggcacttcggcttcagcctggaagagcccttccaggacctcgacccg
gagcaccagaagttcatcctcaacggctcggggcgcgagaacgtcgaattccgctacctc
aacgaccgcggcgacatcgtcaaacgcgcgcacccgttcgaaggcatcctgcccaacctg
gagcgccgctaccgcgagaccgagtcggccaccgtgcgcgaggaactggccaagttcctc
agcacccagccctgcccggactgccacggcacccgcctgcgccgcgaggcgcgccacgtg
tgggtgggcgacaagacgctgccggcgatcacctcgatgccggtgggcaccgcctgtgaa
tacgccgagagcctgaccctgaccggccgccgtggcgagatcgcctcgaagatcctcaag
gagattcgcgagcgcctgcagttcctggtcaacgtcggcctcgactacctgaccctggat
cgcagcgccgacaccctgtccggcggcgaggcccagcgcatccgcctggccagccagatc
ggcgcgggcctggtgggcgtcatgtacatcctcgacgaaccctccatcggcctgcatcag
cgcgacaacgaacgcctgctgggcaccctcacccacctacgcaacctgggcaacacggtg
atcgtggtcgagcatgacgaggacgcgattcgcctggccgactacgtggtggacatcggc
cccggcgccggcgtgcacggtgggcagatcgttgcagaggggacaccgcaggaggtcatg
gatcacccggactcggtcaccggcaaatacctgtccggccgcaccaagatcctggttccg
gccgagcgcacaccgcgcaacaagaagcagttgctcaagctcaagggcgcgcgcggcaac
aacctgcagaacgtcaacctggaaatcccggtcggcctgttcacctgcgttaccggggtg
tccggctccggcaagtcgacgctgatcaacaacaccctgttcccgatcaccgccaccgcg
ctcaacggcgccaccagcctggaggtcgcgccgcacgactccttcgacggcctgcagcac
ctggacaaggtggtggacatcgaccagagcccgatcggtcgcacgccacgctccaacccc
gcgacctacaccggcctgttcacaccgatccgcgagctgttcgctggcgtaccggaagcc
cgttcgcgcggctacggcccggggcgcttctccttcaacgtgaagggcggccgctgcgaa
gcctgccagggcgacggcgtgatcaaggtggagatgcacttcctgccggacatctacgtc
ccctgcgacgtctgcaagggcaagcgctacaaccgcgagaccctggaagtccgctacaag
ggcaagagcatcaccgaggtgctggacatgaccatcgaggacgcgcgcgagttcttcgac
gccgtcccggccatcgcccgcaagctgcagacgctgatggacgtcggcctgtcgtacatc
aagctgggccagagcgcgaccacgctgtccggcggtgaggcgcagcgggtgaagctgtcc
cgcgagctgtccaagcgcgataccggcaagaccctgtacatcctcgacgagccgaccacc
ggcctgcacttcgcggatatccagcagttgctcgacgtgctgcaccgcctgcgcgaccac
ggcaacaccgtggtggtgatcgagcacaacctggacgtgatcaagaccgccgactggctg
gtcgacctcggcccggagggcggctccaagggcggccagatcatcgccgttggcacgccg
gagcaggtcgcggacatggaggcgtcgcacaccggacgcttcctcaaaccgctgctggag
cgcgatcgggcctga
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