Pseudomonas macauensis: SD196_03210
Help
Entry
SD196_03210 CDS
T11012
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pswo Pseudomonas macauensis
Pathway
pswo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswo03021
]
SD196_03210
Transcription machinery [BR:
pswo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SD196_03210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_29
HTH_11
HTH_24
Xre-like-HTH
GerE
HTH_Tnp_ISL3
HTH_Tnp_4
HTH_7
HTH_36
Motif
Other DBs
NCBI-ProteinID:
XOT23237
LinkDB
All DBs
Position
complement(680550..681047)
Genome browser
AA seq
165 aa
AA seq
DB search
MSSTFDVHALYSDHHGWLHNWLRSRLGNAADAADLAQDTFVRVLLKPERIELHTPRAFLR
VIARGLVIDHWRREELERAYLDAIAHLPQAEVPSAEARQSILQLLENIARLLDGLKPKVR
SAFLLAQCEGLPHAQIAKQLGVSVRSVERYVAEALFHCYQLRYAE
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccacgttcgatgtccacgcgctctacagtgaccaccacggctggctgcacaac
tggttgcgcagccggctgggcaatgccgccgatgccgcagacctggcccaggacaccttc
gtgcgcgtgctgctcaagcccgagcgcatcgaactgcacacgccgcgcgccttcctgcgg
gtcatcgctcgcggcctggtgatcgaccactggcggcgcgaggaactcgagcgcgcctac
ctcgacgccatcgcccatctgcctcaagcggaagtgccctcggcagaggcacggcagagc
atcctgcagttgctggaaaacatcgcccgcctgctcgacggcctcaagcccaaggtgcgc
agcgccttcctgctggcccaatgcgagggcctgccccatgcgcagatcgccaagcagctc
ggcgtctccgtgcgctcggtggagcgctacgtcgccgaagcgctgttccactgctaccag
ctgcggtacgccgaatga
DBGET
integrated database retrieval system
