Pseudomonas sp. W03: SD196_03510
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Entry
SD196_03510 CDS
T11012
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo00550
Peptidoglycan biosynthesis
pswo01100
Metabolic pathways
pswo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD196_03510 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD196_03510 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pswo01011
]
SD196_03510 (mrdA)
Enzymes [BR:
pswo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SD196_03510 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pswo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SD196_03510 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
XOT23293
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Position
737653..739542
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AA seq
629 aa
AA seq
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MPQPIQLKDHEKDARLVRARVIVGGVAIFLLALVLVARMYHLQVTQYDYHSTLSENNRVH
VQPIPPNRGLIFDRNGVIIADNRPSFSLTITRERTENLKDTLKTLVDILGLTEEDQAIFE
KRMKQGRRPFEPVPIMFELSEEQIARIAVNQYRLPGVDVAAQFVRHYPLGEHFAHSVGYV
GRINEAELKKLDPVAYSGTHHIGKTGVEKFYENELHGTVGYEEVETNARGRVLRVLKRTE
PVSGRDIVLSIDSKLQAKAEEALAGRRGAIVAIQPSTGDVLAMVSQPSYDPNLFVTGISF
KDYSALRDSEDRPLYNRVLRGLYPPGSTVKPAVAIAGLDAGVVTPATRVFDPGYYQLPNY
DHKYRNWNRSGDGWVNLETAIMRSNDTYFYDLAHKLGIDRLHDYMSEFGFGQRVALDMFG
EAEGLMPSRQWKRALRRQAWFPGETLILGIGQGYMQATPLQLAQMTSLIANKGKWIRPHL
AKTIDGQPPVDPEPMPDILLKDPNNWSLVDNGMQQVVHGARGTAHKVGATAVYRIAGKSG
TAQVVAIKQGEKYDRSKLLERHRDHALFVGFAPADNPQIAVAVMVENGESGSGVAAPVLK
QVMDAWLLDENGKLKPEYAPQATAEAAKP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgatacagctcaaggaccacgagaaggacgcccgcctggtccgcgcccgc
gtcatcgtcggcggggtggcgatcttcctgctggcgctggtgctggtggcgcgcatgtat
cacctgcaggtgacgcagtacgactaccactcgacgctgtcggaaaacaaccgcgtccac
gtccagccgattccgcccaaccgcgggctgatcttcgaccgcaacggcgtgatcatcgcc
gacaaccgtcccagcttcagcctgaccatcacccgcgagcgcaccgagaacctcaaggac
acgctcaagaccctggtggacatcctcggcctcaccgaggaagaccaggccatcttcgag
aagcgcatgaagcagggccgcaggccgttcgagccggtgccgatcatgttcgagctgtcc
gaagagcagatcgcccgcatcgcggtgaaccagtaccgcctgcccggcgtcgatgtggcc
gcgcagttcgtccgccattacccgctgggcgagcacttcgcccactcggtcggctacgtc
gggcggatcaacgaggcggagctcaagaagctcgacccggtggcctattccggcacccac
cacatcggcaagaccggcgtggagaagttctacgagaacgaactgcacggcaccgtgggt
tacgaggaagtagagaccaacgcccgtggccgcgtgctgcgcgtgctcaagcgcaccgag
ccggtgtccggccgcgacatcgtactgagcatcgacagcaagctgcaggccaaggccgag
gaggcactggccggccgtcgtggcgccatcgtggcgatccagccgtccaccggcgacgtg
ctggcgatggtcagccagccgagctacgaccccaacctgttcgtcaccggcatcagcttc
aaggactattccgccctgcgcgattccgaggaccgcccgctgtacaaccgcgtgctgcgc
ggcctctatccgccgggctcgacggtgaaaccggcggtggccatcgcaggcctcgacgcc
ggcgtggtgacgcccgccacccgtgtgttcgaccccggctactaccaactgccgaactat
gaccacaagtaccgcaactggaaccgctcgggcgatggctgggtgaacctggaaaccgcg
atcatgcggtccaacgacacctacttctacgacctggcccacaagctggggatcgaccgc
ctgcacgactacatgagcgagttcggcttcggccagcgcgtggccctggacatgttcggc
gaggccgagggcctgatgccctcgcgccagtggaagcgcgcccttcgccgccaggcctgg
ttccccggcgagacgctgatcctcggtatcggccagggctacatgcaggccacgccgctg
cagctggcgcagatgacctcgctgatcgccaacaagggcaagtggatccgtccgcacctg
gccaagaccatcgacggccagccgccggtggaccccgaaccgatgccggacatcctgctc
aaggacccgaacaactggagcctggtcgacaatggcatgcagcaggtggtccacggtgcc
cgtggcaccgcgcacaaggtcggcgccaccgccgtctatcgcatcgccggcaagtccggt
acggcgcaggtggtggcgatcaagcagggcgagaagtacgaccgctccaagctcctcgaa
cggcaccgtgaccacgccctgttcgtcggcttcgccccggcggacaacccgcagatcgcc
gtggcagtgatggtggagaacggcgagtccggctccggcgtcgccgcacccgtgctcaag
caggtgatggacgcctggctgctcgacgagaacggcaagctcaagcctgaatacgcgccc
caggccacggcggaggccgccaagccatga
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