Pseudomonas sp. W03: SD196_04325
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Entry
SD196_04325 CDS
T11012
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo00260
Glycine, serine and threonine metabolism
pswo00460
Cyanoamino acid metabolism
pswo00630
Glyoxylate and dicarboxylate metabolism
pswo00670
One carbon pool by folate
pswo00680
Methane metabolism
pswo01100
Metabolic pathways
pswo01110
Biosynthesis of secondary metabolites
pswo01120
Microbial metabolism in diverse environments
pswo01200
Carbon metabolism
pswo01230
Biosynthesis of amino acids
pswo01240
Biosynthesis of cofactors
pswo04981
Folate transport and metabolism
Module
pswo_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SD196_04325 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SD196_04325 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SD196_04325 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SD196_04325 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SD196_04325 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SD196_04325 (glyA)
Enzymes [BR:
pswo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SD196_04325 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
XOT23441
LinkDB
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Position
complement(911829..913082)
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AA seq
417 aa
AA seq
DB search
MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLNAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVLKNAQTMASV
FIERGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEAECRELAGWICDILTNMGDESVVDSVREKVKAICAKFPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccctcgcccgctacgatgccgaactcttcgccgcgatggag
caggaagcccagcgccaggaagagcacatcgagctcatcgcctccgagaactacaccagc
ccggcggtgatggaagcccagggttcggtgctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggttgcgagtacgtcgacatcgtcgagcaactggccatcgac
cgcgccaaagagctgttcggcgccgactacgccaacgtccagccgcacgccggctcccag
gccaactccgccgtctacctggccctgctcaacgccggtgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgt
ctggctgtcgagcacaagccgaagatgatcgtcgccggcttctccgcctactcccaggtg
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccatgtggccggtctggtcgccgcaggcgtctacccgaacccggtgccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgccaaggccgtgtgcttcaaggaagccctgcag
cccgagttcaaggcctaccagcagcaggtcctgaagaacgcccagaccatggccagcgtg
ttcatcgagcgcggcttcgacgtggtttccggcggtacccagaaccacctgttcctgctg
tccctgatcaagcaggacatcaccggtaaggacgccgacgctgccctgggtcgcgccttc
atcaccgtgaacaagaacagcgtgccgaacgacccgcgttccccgttcgtcacctccggc
ctgcgcatcggcaccccggccgtcaccactcgcggcttcaaggaagccgagtgccgcgag
ctggctggctggatctgcgacatcctgaccaacatgggcgacgagtccgtggtggacagc
gtgcgtgagaaggtcaaggccatctgcgccaagttcccggtatacggcgcctaa
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